Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MTND4P5-201ENST00000435821 1374 ntBASIC0.31□□□□□ -2.36
CTSDP07339 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CTSDP07339 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CTSDP07339 RNU6-500P-201ENST00000362349 107 ntBASIC0.3□□□□□ -2.36
CTSDP07339 RNU6-1240P-201ENST00000365155 104 ntBASIC0.3□□□□□ -2.36
CTSDP07339 Y_RNA.354-201ENST00000365448 111 ntBASIC0.3□□□□□ -2.36
CTSDP07339 RNU6-945P-201ENST00000383947 107 ntBASIC0.3□□□□□ -2.36
CTSDP07339 SNORD116-13-201ENST00000384408 92 ntBASIC0.3□□□□□ -2.36
CTSDP07339 SNORA75.2-201ENST00000391138 150 ntBASIC0.3□□□□□ -2.36
CTSDP07339 SNORA75.3-201ENST00000391231 150 ntBASIC0.3□□□□□ -2.36
CTSDP07339 RNU1-139P-201ENST00000391307 165 ntBASIC0.3□□□□□ -2.36
CTSDP07339 MIR936-201ENST00000401264 98 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.3□□□□□ -2.36
CTSDP07339 AC098592.1-201ENST00000419352 333 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.3□□□□□ -2.36
CTSDP07339 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.3□□□□□ -2.36
CTSDP07339 MTCO3P8-201ENST00000453691 755 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AC022364.2-201ENST00000457963 554 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AL049830.1-201ENST00000468034 425 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.3□□□□□ -2.36
CTSDP07339 SNORA70.12-201ENST00000516084 153 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AC025647.1-201ENST00000517879 253 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.3□□□□□ -2.36
CTSDP07339 AGGF1P4-201ENST00000568249 801 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AP000907.4-201ENST00000604143 237 ntBASIC0.3□□□□□ -2.36
CTSDP07339 PRELID3BP2-201ENST00000605362 201 ntBASIC0.3□□□□□ -2.36
CTSDP07339 MIR6515-201ENST00000619843 57 ntBASIC0.3□□□□□ -2.36
CTSDP07339 AC068792.1-201ENST00000621354 417 ntBASIC0.3□□□□□ -2.36
CTSDP07339 snoZ196.1-201ENST00000625269 89 ntBASIC0.3□□□□□ -2.36
CTSDP07339 Y_RNA.269-201ENST00000364685 89 ntBASIC0.29□□□□□ -2.36
CTSDP07339 RNU4-48P-201ENST00000365559 182 ntBASIC0.29□□□□□ -2.36
CTSDP07339 RNU6-74P-201ENST00000384235 107 ntBASIC0.29□□□□□ -2.36
CTSDP07339 RNU6-1127P-201ENST00000384580 107 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AL031577.2-201ENST00000404133 280 ntBASIC0.29□□□□□ -2.36
CTSDP07339 Y_RNA.598-201ENST00000410480 95 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AC004866.1-201ENST00000411748 78 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AL008987.1-201ENST00000415528 237 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AL445305.1-201ENST00000432577 575 ntBASIC0.29□□□□□ -2.36
CTSDP07339 MTCO2P3-201ENST00000442543 421 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.29□□□□□ -2.36
CTSDP07339 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.29□□□□□ -2.36
CTSDP07339 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.29□□□□□ -2.36
CTSDP07339 AC025465.4-201ENST00000513422 638 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AC010493.1-201ENST00000513479 292 ntBASIC0.29□□□□□ -2.36
CTSDP07339 RNU6-496P-201ENST00000516145 99 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.29□□□□□ -2.36
CTSDP07339 AC068790.2-201ENST00000602601 557 ntBASIC0.29□□□□□ -2.36
CTSDP07339 MIR7844-201ENST00000616161 122 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AC007671.2-201ENST00000637344 619 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
CTSDP07339 AP000568.1-201ENST00000282964 442 ntBASIC0.28□□□□□ -2.36
CTSDP07339 RNU5B-2P-201ENST00000363036 113 ntBASIC0.28□□□□□ -2.36
CTSDP07339 SNORD113-6-201ENST00000363345 75 ntBASIC0.28□□□□□ -2.36
CTSDP07339 RNU6-1097P-201ENST00000363586 107 ntBASIC0.28□□□□□ -2.36
CTSDP07339 SNORA2.2-201ENST00000365473 135 ntBASIC0.28□□□□□ -2.36
CTSDP07339 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
CTSDP07339 RNU6-1106P-201ENST00000390845 107 ntBASIC0.28□□□□□ -2.36
CTSDP07339 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CTSDP07339 AL354692.1-201ENST00000423044 315 ntBASIC0.28□□□□□ -2.36
CTSDP07339 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.28□□□□□ -2.36
CTSDP07339 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.28□□□□□ -2.36
CTSDP07339 RPS29P15-201ENST00000458329 171 ntBASIC0.28□□□□□ -2.36
CTSDP07339 snoU13.25-201ENST00000458945 104 ntBASIC0.28□□□□□ -2.36
CTSDP07339 RNU6-221P-201ENST00000459541 99 ntBASIC0.28□□□□□ -2.36
CTSDP07339 RNU7-94P-201ENST00000459576 63 ntBASIC0.28□□□□□ -2.36
CTSDP07339 GMFBP1-201ENST00000467831 427 ntBASIC0.28□□□□□ -2.36
CTSDP07339 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.28□□□□□ -2.36
CTSDP07339 RNU6-323P-201ENST00000521915 107 ntBASIC0.28□□□□□ -2.36
CTSDP07339 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.28□□□□□ -2.36
CTSDP07339 MIR4703-201ENST00000577728 79 ntBASIC0.28□□□□□ -2.36
CTSDP07339 AC025449.1-201ENST00000603896 529 ntBASIC0.28□□□□□ -2.36
CTSDP07339 SNRPGP20-201ENST00000604477 205 ntBASIC0.28□□□□□ -2.36
CTSDP07339 SNORA28-201ENST00000606769 126 ntBASIC0.28□□□□□ -2.36
CTSDP07339 AL360219.1-201ENST00000610230 366 ntBASIC0.28□□□□□ -2.36
CTSDP07339 AC243829.6-201ENST00000612652 106 ntBASIC0.28□□□□□ -2.36
CTSDP07339 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.28□□□□□ -2.36
CTSDP07339 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.28□□□□□ -2.36
CTSDP07339 AL078596.1-201ENST00000624856 447 ntBASIC0.28□□□□□ -2.36
CTSDP07339 AC008873.1-201ENST00000625051 138 ntBASIC0.28□□□□□ -2.36
CTSDP07339 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
CTSDP07339 RNU6-108P-201ENST00000365558 107 ntBASIC0.27□□□□□ -2.37
CTSDP07339 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.27□□□□□ -2.37
CTSDP07339 Y_RNA.399-201ENST00000383955 105 ntBASIC0.27□□□□□ -2.37
CTSDP07339 RNU6-1186P-201ENST00000410429 97 ntBASIC0.27□□□□□ -2.37
CTSDP07339 RNA5SP494-201ENST00000410653 129 ntBASIC0.27□□□□□ -2.37
CTSDP07339 AL009048.1-201ENST00000450437 298 ntBASIC0.27□□□□□ -2.37
CTSDP07339 AC245047.8-201ENST00000456455 284 ntBASIC0.27□□□□□ -2.37
CTSDP07339 snoU13.18-201ENST00000459483 104 ntBASIC0.27□□□□□ -2.37
CTSDP07339 AC007215.1-201ENST00000464893 276 ntBASIC0.27□□□□□ -2.37
CTSDP07339 RNU6-917P-201ENST00000516294 104 ntBASIC0.27□□□□□ -2.37
CTSDP07339 RNU7-128P-201ENST00000517247 62 ntBASIC0.27□□□□□ -2.37
CTSDP07339 AP002001.1-203ENST00000534002 267 ntBASIC0.27□□□□□ -2.37
CTSDP07339 SUB1P2-201ENST00000556401 297 ntBASIC0.27□□□□□ -2.37
CTSDP07339 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.27□□□□□ -2.37
CTSDP07339 MIR4711-201ENST00000578274 70 ntBASIC0.27□□□□□ -2.37
CTSDP07339 AC025627.3-201ENST00000582078 182 ntBASIC0.27□□□□□ -2.37
CTSDP07339 BNIP3P39-201ENST00000601077 554 ntBASIC0.27□□□□□ -2.37
CTSDP07339 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
CTSDP07339 RNU6-85P-201ENST00000605989 107 ntBASIC0.27□□□□□ -2.37
CTSDP07339 RNU6-227P-201ENST00000362865 103 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms