Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PISRT1.1-201ENST00000616930 107 ntBASIC2.12□□□□□ -2.07
RB1P06400 AC091932.3-201ENST00000624223 323 ntBASIC2.12□□□□□ -2.07
RB1P06400 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.12□□□□□ -2.07
RB1P06400 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RB1P06400 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RB1P06400 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
RB1P06400 WWP1P1-201ENST00000466609 2769 ntBASIC2.12□□□□□ -2.07
RB1P06400 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RB1P06400 RNU6-545P-201ENST00000362681 104 ntBASIC2.11□□□□□ -2.07
RB1P06400 RNU6-23P-201ENST00000363283 107 ntBASIC2.11□□□□□ -2.07
RB1P06400 Y_RNA.142-201ENST00000363491 102 ntBASIC2.11□□□□□ -2.07
RB1P06400 Y_RNA.405-201ENST00000383979 100 ntBASIC2.11□□□□□ -2.07
RB1P06400 Y_RNA.451-201ENST00000384200 100 ntBASIC2.11□□□□□ -2.07
RB1P06400 Y_RNA.524-201ENST00000384564 100 ntBASIC2.11□□□□□ -2.07
RB1P06400 Y_RNA.561-201ENST00000384694 100 ntBASIC2.11□□□□□ -2.07
RB1P06400 MIR597-201ENST00000384968 97 ntBASIC2.11□□□□□ -2.07
RB1P06400 RNU11-3P-201ENST00000391111 133 ntBASIC2.11□□□□□ -2.07
RB1P06400 MIR300-201ENST00000401138 83 ntBASIC2.11□□□□□ -2.07
RB1P06400 RNU4-14P-201ENST00000410858 122 ntBASIC2.11□□□□□ -2.07
RB1P06400 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RB1P06400 AC139712.2-201ENST00000424302 339 ntBASIC2.11□□□□□ -2.07
RB1P06400 MTND2P29-201ENST00000438595 412 ntBASIC2.11□□□□□ -2.07
RB1P06400 AC007395.1-201ENST00000451333 677 ntBASIC2.11□□□□□ -2.07
RB1P06400 RNU1-131P-201ENST00000458943 161 ntBASIC2.11□□□□□ -2.07
RB1P06400 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.11□□□□□ -2.07
RB1P06400 AP005660.1-201ENST00000522972 293 ntBASIC2.11□□□□□ -2.07
RB1P06400 AC134698.4-201ENST00000523451 826 ntBASIC2.11□□□□□ -2.07
RB1P06400 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
RB1P06400 AL121579.1-201ENST00000555129 305 ntBASIC2.11□□□□□ -2.07
RB1P06400 MIR5701-3-201ENST00000578890 82 ntBASIC2.11□□□□□ -2.07
RB1P06400 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
RB1P06400 MIR5701-1-201ENST00000585138 82 ntBASIC2.11□□□□□ -2.07
RB1P06400 MIR5701-2-201ENST00000615634 82 ntBASIC2.11□□□□□ -2.07
RB1P06400 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RB1P06400 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
RB1P06400 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RB1P06400 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RB1P06400 RNA5SP493-201ENST00000364115 91 ntBASIC2.1□□□□□ -2.07
RB1P06400 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
RB1P06400 Y_RNA.404-201ENST00000383978 102 ntBASIC2.1□□□□□ -2.07
RB1P06400 Y_RNA.474-201ENST00000384341 102 ntBASIC2.1□□□□□ -2.07
RB1P06400 RNU6-541P-201ENST00000384709 110 ntBASIC2.1□□□□□ -2.07
RB1P06400 SNORA75.4-201ENST00000391278 119 ntBASIC2.1□□□□□ -2.07
RB1P06400 MIR1283-1-201ENST00000408494 87 ntBASIC2.1□□□□□ -2.07
RB1P06400 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.1□□□□□ -2.07
RB1P06400 RNA5SP384-201ENST00000516615 116 ntBASIC2.1□□□□□ -2.07
RB1P06400 MIR3169-201ENST00000578032 83 ntBASIC2.1□□□□□ -2.07
RB1P06400 MIR548S-201ENST00000581352 82 ntBASIC2.1□□□□□ -2.07
RB1P06400 MIR4781-201ENST00000585250 76 ntBASIC2.1□□□□□ -2.07
RB1P06400 AC100812.1-201ENST00000607622 580 ntBASIC2.1□□□□□ -2.07
RB1P06400 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.1□□□□□ -2.07
RB1P06400 AL669831.3-213ENST00000636676 183 ntBASIC2.1□□□□□ -2.07
RB1P06400 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RB1P06400 SNORD114-6-201ENST00000364393 72 ntBASIC2.09□□□□□ -2.07
RB1P06400 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RB1P06400 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RB1P06400 AL512604.1-201ENST00000404812 257 ntBASIC2.09□□□□□ -2.07
RB1P06400 RNU6-370P-201ENST00000411008 104 ntBASIC2.09□□□□□ -2.07
RB1P06400 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RB1P06400 AC096920.1-201ENST00000423991 241 ntBASIC2.09□□□□□ -2.07
RB1P06400 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
RB1P06400 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.09□□□□□ -2.07
RB1P06400 MTCO1P44-201ENST00000441935 243 ntBASIC2.09□□□□□ -2.07
RB1P06400 AC010531.2-201ENST00000465012 153 ntBASIC2.09□□□□□ -2.07
RB1P06400 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.09□□□□□ -2.07
RB1P06400 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.09□□□□□ -2.07
RB1P06400 RNU6-307P-201ENST00000516743 106 ntBASIC2.09□□□□□ -2.07
RB1P06400 Y_RNA.706-201ENST00000516933 99 ntBASIC2.09□□□□□ -2.07
RB1P06400 RRN3P3-201ENST00000549207 578 ntBASIC2.09□□□□□ -2.07
RB1P06400 AC005899.2-201ENST00000584353 90 ntBASIC2.09□□□□□ -2.07
RB1P06400 MIR4753-201ENST00000585119 83 ntBASIC2.09□□□□□ -2.07
RB1P06400 CYP2C61P-201ENST00000604072 290 ntBASIC2.09□□□□□ -2.07
RB1P06400 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
RB1P06400 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RB1P06400 ZNF720P1-201ENST00000562403 1939 ntBASIC2.09□□□□□ -2.08
RB1P06400 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
RB1P06400 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.08□□□□□ -2.08
RB1P06400 MIR378A-201ENST00000362177 66 ntBASIC2.08□□□□□ -2.08
RB1P06400 RNY1P16-201ENST00000363063 111 ntBASIC2.08□□□□□ -2.08
RB1P06400 Y_RNA.132-201ENST00000363421 102 ntBASIC2.08□□□□□ -2.08
RB1P06400 RNU6-873P-201ENST00000363833 107 ntBASIC2.08□□□□□ -2.08
RB1P06400 RNU6-331P-201ENST00000384724 107 ntBASIC2.08□□□□□ -2.08
RB1P06400 RNU6-159P-201ENST00000391080 106 ntBASIC2.08□□□□□ -2.08
RB1P06400 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.08□□□□□ -2.08
RB1P06400 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RB1P06400 AL353997.1-201ENST00000432936 108 ntBASIC2.08□□□□□ -2.08
RB1P06400 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.08□□□□□ -2.08
RB1P06400 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.08□□□□□ -2.08
RB1P06400 RPL23AP63-201ENST00000498752 471 ntBASIC2.08□□□□□ -2.08
RB1P06400 SCARNA16.2-201ENST00000516520 172 ntBASIC2.08□□□□□ -2.08
RB1P06400 RNU6-344P-201ENST00000516635 111 ntBASIC2.08□□□□□ -2.08
RB1P06400 RNU6-1213P-201ENST00000517075 94 ntBASIC2.08□□□□□ -2.08
RB1P06400 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.08□□□□□ -2.08
RB1P06400 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.08□□□□□ -2.08
RB1P06400 AC005034.5-201ENST00000604219 466 ntBASIC2.08□□□□□ -2.08
RB1P06400 AC113139.1-201ENST00000605049 239 ntBASIC2.08□□□□□ -2.08
RB1P06400 AL355802.3-201ENST00000607571 545 ntBASIC2.08□□□□□ -2.08
RB1P06400 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.08□□□□□ -2.08
RB1P06400 ZNF702P-202ENST00000434269 1966 ntBASIC2.08□□□□□ -2.08
RB1P06400 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms