Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOAP06340 SEPT14P8-201ENST00000508026 178 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 AC105137.2-201ENST00000569073 466 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOAP06340 AC008749.1-201ENST00000597650 306 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 SNORD113-5-201ENST00000607261 78 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 FTX_2.1-201ENST00000618816 94 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 AC137590.2-201ENST00000619709 240 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 AC064859.1-201ENST00000624741 174 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 U6.98-201ENST00000637157 84 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DOAP06340 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 Y_RNA.44-201ENST00000362676 108 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 RNU6-1159P-201ENST00000362933 107 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 RNU6-378P-201ENST00000384324 107 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 RNU6-21P-201ENST00000384710 107 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 Y_RNA.569-201ENST00000384749 103 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 RNU1-101P-201ENST00000391171 127 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 RNU6-493P-201ENST00000391321 108 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 AL359511.1-201ENST00000402970 211 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 AL590004.2-201ENST00000404787 371 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 Z98742.2-201ENST00000431564 187 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 HMGN2P20-201ENST00000437531 273 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 AC091179.3-201ENST00000474761 144 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 AIG1P1-201ENST00000503376 148 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 RNA5SP24-201ENST00000516478 95 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 RNU6-182P-201ENST00000516970 105 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 AP002001.1-203ENST00000534002 267 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 MIR5092-201ENST00000583139 88 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 AL138963.2-201ENST00000605137 226 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 AC010999.1-201ENST00000611856 324 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.95□□□□□ -1.94
HLA-DOAP06340 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DOAP06340 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DOAP06340 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DOAP06340 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DOAP06340 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DOAP06340 MTND5P35-201ENST00000557537 1720 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 Y_RNA.29-201ENST00000362570 113 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 Y_RNA.101-201ENST00000363154 102 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 CD24P4-201ENST00000382840 243 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 RNA5SP354-201ENST00000391247 136 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 MIR208B-201ENST00000401172 77 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 AC004866.1-201ENST00000411748 78 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 AC096649.2-201ENST00000416186 393 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DOAP06340 AL441985.1-201ENST00000457727 251 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 RAC1P5-201ENST00000512182 576 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 AC107393.1-201ENST00000512403 346 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 RNU2-31P-201ENST00000516954 155 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 AC022559.1-201ENST00000520905 205 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DOAP06340 AK6P2-201ENST00000549020 471 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 MIR3145-201ENST00000580727 82 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DOAP06340 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 AC110079.1-202ENST00000635213 138 ntBASIC2.94□□□□□ -1.94
HLA-DOAP06340 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DOAP06340 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DOAP06340 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DOAP06340 RNA5SP289-201ENST00000362332 137 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 Y_RNA.83-201ENST00000363005 113 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 SNORD114-19-201ENST00000363072 75 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 RNU6-774P-201ENST00000363238 107 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 Y_RNA.199-201ENST00000364014 102 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 Y_RNA.331-201ENST00000365267 102 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 SNORD21-201ENST00000383953 95 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 CBX3P9-201ENST00000402326 552 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 AL033519.2-201ENST00000403958 392 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 RNU5A-5P-201ENST00000411054 116 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 AC234781.5-201ENST00000508429 271 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 AC024405.2-202ENST00000532731 184 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 AC026470.2-201ENST00000561492 181 ntBASIC2.93□□□□□ -1.94
HLA-DOAP06340 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DOAP06340 AC002543.1-201ENST00000299783 1954 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.92□□□□□ -1.94
HLA-DOAP06340 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HLA-DOAP06340 RNU6-137P-201ENST00000363680 108 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 RNA5SP456-201ENST00000364002 114 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 Y_RNA.383-201ENST00000383855 97 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 RNU6-47P-201ENST00000383866 107 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 SNORA70B-201ENST00000384210 135 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 MIR591-201ENST00000385290 95 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 SNORA53-201ENST00000391141 249 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 PCNPP3-201ENST00000393579 471 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 Y_RNA.595-201ENST00000410403 105 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 RNU4-53P-201ENST00000410828 140 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 ELOCP21-201ENST00000412558 336 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 AIMP1P2-201ENST00000425294 312 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 MTCO1P5-201ENST00000433573 344 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms