Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.07□□□□□ -2.08
RAF1P04049 AC137590.2-201ENST00000619709 240 ntBASIC2.07□□□□□ -2.08
RAF1P04049 AC138305.3-201ENST00000624988 240 ntBASIC2.07□□□□□ -2.08
RAF1P04049 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RAF1P04049 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAF1P04049 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAF1P04049 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RAF1P04049 RNU6-1159P-201ENST00000362933 107 ntBASIC2.06□□□□□ -2.08
RAF1P04049 Y_RNA.148-201ENST00000363557 117 ntBASIC2.06□□□□□ -2.08
RAF1P04049 RNU1-115P-201ENST00000365329 160 ntBASIC2.06□□□□□ -2.08
RAF1P04049 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
RAF1P04049 SNORA46.1-201ENST00000391069 153 ntBASIC2.06□□□□□ -2.08
RAF1P04049 SNORA12-201ENST00000391162 147 ntBASIC2.06□□□□□ -2.08
RAF1P04049 RNU6-1093P-201ENST00000391194 107 ntBASIC2.06□□□□□ -2.08
RAF1P04049 MIR208B-201ENST00000401172 77 ntBASIC2.06□□□□□ -2.08
RAF1P04049 RNA5SP270-201ENST00000411361 118 ntBASIC2.06□□□□□ -2.08
RAF1P04049 AC096644.2-201ENST00000429278 159 ntBASIC2.06□□□□□ -2.08
RAF1P04049 AL160004.2-201ENST00000432935 350 ntBASIC2.06□□□□□ -2.08
RAF1P04049 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.06□□□□□ -2.08
RAF1P04049 RNU7-169P-201ENST00000459456 61 ntBASIC2.06□□□□□ -2.08
RAF1P04049 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.06□□□□□ -2.08
RAF1P04049 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.06□□□□□ -2.08
RAF1P04049 RNU4-77P-201ENST00000516692 156 ntBASIC2.06□□□□□ -2.08
RAF1P04049 RNU7-4P-201ENST00000516961 62 ntBASIC2.06□□□□□ -2.08
RAF1P04049 RNU6-667P-201ENST00000517186 102 ntBASIC2.06□□□□□ -2.08
RAF1P04049 AC034114.1-201ENST00000520293 285 ntBASIC2.06□□□□□ -2.08
RAF1P04049 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.06□□□□□ -2.08
RAF1P04049 AC027288.2-201ENST00000553028 243 ntBASIC2.06□□□□□ -2.08
RAF1P04049 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.06□□□□□ -2.08
RAF1P04049 AC103810.6-201ENST00000606708 136 ntBASIC2.06□□□□□ -2.08
RAF1P04049 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
RAF1P04049 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.06□□□□□ -2.08
RAF1P04049 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAF1P04049 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RAF1P04049 MTND5P16-201ENST00000460269 1703 ntBASIC2.05□□□□□ -2.08
RAF1P04049 RNU6-222P-201ENST00000362438 107 ntBASIC2.05□□□□□ -2.08
RAF1P04049 Y_RNA.80-201ENST00000362996 102 ntBASIC2.05□□□□□ -2.08
RAF1P04049 SNORA63-201ENST00000363450 132 ntBASIC2.05□□□□□ -2.08
RAF1P04049 SNORD115-8-201ENST00000363856 82 ntBASIC2.05□□□□□ -2.08
RAF1P04049 RNU4-42P-201ENST00000364738 142 ntBASIC2.05□□□□□ -2.08
RAF1P04049 SNORD115-38-201ENST00000365037 82 ntBASIC2.05□□□□□ -2.08
RAF1P04049 Y_RNA.358-201ENST00000365491 99 ntBASIC2.05□□□□□ -2.08
RAF1P04049 Y_RNA.364-201ENST00000365532 101 ntBASIC2.05□□□□□ -2.08
RAF1P04049 Y_RNA.485-201ENST00000384395 102 ntBASIC2.05□□□□□ -2.08
RAF1P04049 MIR549A-201ENST00000385268 96 ntBASIC2.05□□□□□ -2.08
RAF1P04049 EDDM3CP-201ENST00000415977 425 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AL603825.1-201ENST00000438481 80 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.05□□□□□ -2.08
RAF1P04049 U8.22-201ENST00000459141 133 ntBASIC2.05□□□□□ -2.08
RAF1P04049 RNU7-87P-201ENST00000459343 62 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AP000870.1-201ENST00000472927 406 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.05□□□□□ -2.08
RAF1P04049 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
RAF1P04049 RNU6-58P-201ENST00000517143 103 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AL442663.2-201ENST00000554385 511 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.05□□□□□ -2.08
RAF1P04049 AC022432.1-201ENST00000595739 310 ntBASIC2.05□□□□□ -2.08
RAF1P04049 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.05□□□□□ -2.08
RAF1P04049 SNORD58B-201ENST00000607313 66 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AC083806.3-201ENST00000614016 455 ntBASIC2.05□□□□□ -2.08
RAF1P04049 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
RAF1P04049 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RAF1P04049 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.202-201ENST00000364083 110 ntBASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.319-201ENST00000365138 92 ntBASIC2.04□□□□□ -2.08
RAF1P04049 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.557-201ENST00000384680 107 ntBASIC2.04□□□□□ -2.08
RAF1P04049 SNORA69.1-201ENST00000390904 137 ntBASIC2.04□□□□□ -2.08
RAF1P04049 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.592-201ENST00000410274 109 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AL445305.1-201ENST00000432577 575 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.04□□□□□ -2.08
RAF1P04049 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.04□□□□□ -2.08
RAF1P04049 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
RAF1P04049 AC007215.1-201ENST00000464893 276 ntBASIC2.04□□□□□ -2.08
RAF1P04049 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
RAF1P04049 RNA5SP458-201ENST00000516188 119 ntBASIC2.04□□□□□ -2.08
RAF1P04049 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
RAF1P04049 RNU6-988P-201ENST00000519081 107 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AC144568.1-201ENST00000520139 137 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AC022616.8-201ENST00000533569 253 ntBASIC2.04□□□□□ -2.08
RAF1P04049 UBL5P4-201ENST00000562584 236 ntBASIC2.04□□□□□ -2.08
RAF1P04049 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.04□□□□□ -2.08
RAF1P04049 AC016727.2-201ENST00000603988 621 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AC046143.2-201ENST00000609789 160 ntBASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.812-201ENST00000610788 101 ntBASIC2.04□□□□□ -2.08
RAF1P04049 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.784-201ENST00000613803 101 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AC040896.1-201ENST00000613819 479 ntBASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.787-201ENST00000616522 101 ntBASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.780-201ENST00000617336 101 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AL353997.5-201ENST00000618886 171 ntBASIC2.04□□□□□ -2.08
RAF1P04049 Y_RNA.801-201ENST00000619005 101 ntBASIC2.04□□□□□ -2.08
RAF1P04049 AL606534.2-204ENST00000635008 178 ntBASIC2.04□□□□□ -2.08
RAF1P04049 MIR4272-201ENST00000635924 64 ntBASIC2.04□□□□□ -2.08
RAF1P04049 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RAF1P04049 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.03□□□□□ -2.08
RAF1P04049 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.03□□□□□ -2.08
RAF1P04049 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RAF1P04049 U3.9-201ENST00000363823 204 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms