Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SNORA31.20-201ENST00000517111 133 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 MIR5701-3-201ENST00000578890 82 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 MIR5701-1-201ENST00000585138 82 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AC002984.1-201ENST00000591692 448 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AC004852.3-201ENST00000614131 326 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AL161629.2-201ENST00000615347 275 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 MIR5701-2-201ENST00000615634 82 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AL138825.1-201ENST00000618587 192 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 U6.92-201ENST00000636464 89 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL2A1P02458 RNU6-222P-201ENST00000362438 107 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 Y_RNA.270-201ENST00000364693 104 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RNU6-392P-201ENST00000364926 101 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RNU6-102P-201ENST00000384485 104 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MIR325-201ENST00000385260 98 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MIR301A-201ENST00000385261 86 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AL627390.1-201ENST00000396055 340 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MIR190B-201ENST00000401119 79 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 Y_RNA.623-201ENST00000411128 95 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 SDAD1P3-201ENST00000427380 333 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC004383.1-201ENST00000438135 289 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 PIGFP3-201ENST00000441918 722 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC009238.1-201ENST00000442165 424 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC009237.6-201ENST00000446969 424 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 NDUFB1P2-201ENST00000449477 176 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 SNRPGP7-201ENST00000469016 106 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC010285.1-201ENST00000470580 392 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RPS26P21-201ENST00000475397 348 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.17□□□□□ -2.06
COL2A1P02458 RNU6-377P-201ENST00000515965 102 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RNU6-1338P-201ENST00000516328 91 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RNU6-572P-201ENST00000516724 80 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 Y_RNA.713-201ENST00000517013 96 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RNA5SP290-201ENST00000517133 127 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 RNU4-60P-201ENST00000517239 135 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC022868.1-201ENST00000517767 391 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC034114.1-201ENST00000520293 285 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC022559.1-201ENST00000520905 205 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.17□□□□□ -2.06
COL2A1P02458 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.17□□□□□ -2.06
COL2A1P02458 AC087441.2-201ENST00000529141 262 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AL590705.4-201ENST00000532209 134 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.17□□□□□ -2.06
COL2A1P02458 MIR4303-201ENST00000581299 66 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MIR8076-201ENST00000611401 83 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MIR6504-201ENST00000613520 61 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MIR376A1-201ENST00000616574 68 ntBASIC2.17□□□□□ -2.06
COL2A1P02458 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
COL2A1P02458 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
COL2A1P02458 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
COL2A1P02458 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL2A1P02458 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
COL2A1P02458 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
COL2A1P02458 Y_RNA.20-201ENST00000362479 113 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 RNA5SP325-201ENST00000363756 130 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 Y_RNA.245-201ENST00000364493 95 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 Y_RNA.276-201ENST00000364732 109 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 RNU6-395P-201ENST00000365662 106 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 RNU6-356P-201ENST00000384140 107 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 MIR487A-201ENST00000385009 80 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 SNORA12.2-201ENST00000391040 156 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 RN7SKP51-201ENST00000410781 304 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 RNU6-651P-201ENST00000411040 105 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.16□□□□□ -2.06
COL2A1P02458 AL590556.1-201ENST00000423231 483 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AL606753.1-201ENST00000427435 87 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.16□□□□□ -2.06
COL2A1P02458 U8.21-201ENST00000459536 136 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 RPL21P39-201ENST00000463605 483 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AC093591.1-201ENST00000491435 481 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AC074198.2-201ENST00000508153 258 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AL359273.1-201ENST00000510918 627 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 SNORA31.19-201ENST00000517079 126 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 RNA5SP165-201ENST00000517142 115 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AC093023.1-201ENST00000547375 507 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 MIR3690-201ENST00000580266 75 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 MIR3133-201ENST00000583157 78 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AC009779.6-201ENST00000603972 165 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 AC098479.1-201ENST00000609225 154 ntBASIC2.16□□□□□ -2.06
COL2A1P02458 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
COL2A1P02458 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL2A1P02458 RNU6-1266P-201ENST00000362794 105 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 RNU1-76P-201ENST00000362903 159 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 SNORD14B-201ENST00000364533 90 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 Y_RNA.439-201ENST00000384119 94 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 Y_RNA.526-201ENST00000384572 110 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
COL2A1P02458 SNORD115-46-201ENST00000390982 71 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 TMEM167AP1-201ENST00000423409 219 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 AC096920.1-201ENST00000423991 241 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 AC079354.2-201ENST00000453523 154 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 HMGN2P16-201ENST00000456802 261 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 RPS29P27-201ENST00000463711 170 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 RPL30P10-201ENST00000488148 337 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.15□□□□□ -2.06
COL2A1P02458 AC084851.1-201ENST00000529105 249 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 MED28P6-201ENST00000558776 231 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 MIR4300-201ENST00000581016 96 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 BX248123.2-201ENST00000606318 124 ntBASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms