Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.36□□□□□ -2.03
LDLRP01130 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.36□□□□□ -2.03
LDLRP01130 AC004584.2-201ENST00000570407 410 ntBASIC2.36□□□□□ -2.03
LDLRP01130 VN1R91P-201ENST00000594377 169 ntBASIC2.36□□□□□ -2.03
LDLRP01130 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.36□□□□□ -2.03
LDLRP01130 MIR8076-201ENST00000611401 83 ntBASIC2.36□□□□□ -2.03
LDLRP01130 AL159153.1-201ENST00000619688 317 ntBASIC2.36□□□□□ -2.03
LDLRP01130 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.36□□□□□ -2.03
LDLRP01130 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
LDLRP01130 ZNF299P-201ENST00000406845 1804 ntBASIC2.35□□□□□ -2.03
LDLRP01130 snoU2_19.1-201ENST00000362361 80 ntBASIC2.35□□□□□ -2.03
LDLRP01130 Y_RNA.19-201ENST00000362462 99 ntBASIC2.35□□□□□ -2.03
LDLRP01130 Y_RNA.60-201ENST00000362831 98 ntBASIC2.35□□□□□ -2.03
LDLRP01130 RNU6-1285P-201ENST00000363480 105 ntBASIC2.35□□□□□ -2.03
LDLRP01130 RNU6-770P-201ENST00000363929 105 ntBASIC2.35□□□□□ -2.03
LDLRP01130 Y_RNA.238-201ENST00000364441 102 ntBASIC2.35□□□□□ -2.03
LDLRP01130 Y_RNA.350-201ENST00000365409 98 ntBASIC2.35□□□□□ -2.03
LDLRP01130 U6atac.2-201ENST00000408644 118 ntBASIC2.35□□□□□ -2.03
LDLRP01130 RN7SKP223-201ENST00000410582 62 ntBASIC2.35□□□□□ -2.03
LDLRP01130 RNA5SP494-201ENST00000410653 129 ntBASIC2.35□□□□□ -2.03
LDLRP01130 RNU2-64P-201ENST00000411315 191 ntBASIC2.35□□□□□ -2.03
LDLRP01130 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.35□□□□□ -2.03
LDLRP01130 AC079354.2-201ENST00000453523 154 ntBASIC2.35□□□□□ -2.03
LDLRP01130 AL121594.1-201ENST00000475906 575 ntBASIC2.35□□□□□ -2.03
LDLRP01130 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.35□□□□□ -2.03
LDLRP01130 RNU6-548P-201ENST00000517083 115 ntBASIC2.35□□□□□ -2.03
LDLRP01130 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.35□□□□□ -2.03
LDLRP01130 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.35□□□□□ -2.03
LDLRP01130 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.35□□□□□ -2.03
LDLRP01130 AL449363.1-201ENST00000617815 186 ntBASIC2.35□□□□□ -2.03
LDLRP01130 AL138825.1-201ENST00000618587 192 ntBASIC2.35□□□□□ -2.03
LDLRP01130 AC090517.3-201ENST00000625170 141 ntBASIC2.35□□□□□ -2.03
LDLRP01130 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LDLRP01130 MTND5P9-201ENST00000503854 1755 ntBASIC2.34□□□□□ -2.03
LDLRP01130 Y_RNA.14-201ENST00000362415 103 ntBASIC2.34□□□□□ -2.03
LDLRP01130 RNU6-1210P-201ENST00000363775 107 ntBASIC2.34□□□□□ -2.03
LDLRP01130 SNORA51.11-201ENST00000384442 131 ntBASIC2.34□□□□□ -2.03
LDLRP01130 MIR625-201ENST00000385047 85 ntBASIC2.34□□□□□ -2.03
LDLRP01130 MIR1302-6-201ENST00000408466 90 ntBASIC2.34□□□□□ -2.03
LDLRP01130 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.03
LDLRP01130 Y_RNA.592-201ENST00000410274 109 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AL590135.1-201ENST00000422215 156 ntBASIC2.34□□□□□ -2.03
LDLRP01130 EIF4EP2-201ENST00000422816 654 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AC019205.3-201ENST00000424573 156 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AIMP1P2-201ENST00000425294 312 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AC092423.1-201ENST00000430165 186 ntBASIC2.34□□□□□ -2.03
LDLRP01130 GPM6BP3-201ENST00000442797 145 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AC016700.2-201ENST00000446011 156 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AL353705.4-201ENST00000449661 238 ntBASIC2.34□□□□□ -2.03
LDLRP01130 LINC01399-202ENST00000458450 244 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AC098869.1-201ENST00000481627 292 ntBASIC2.34□□□□□ -2.03
LDLRP01130 RNU5F-2P-201ENST00000516066 82 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AC115990.1-201ENST00000526957 301 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.34□□□□□ -2.03
LDLRP01130 AC009318.2-201ENST00000610917 651 ntBASIC2.34□□□□□ -2.03
LDLRP01130 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
LDLRP01130 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LDLRP01130 RNU1-72P-201ENST00000362976 153 ntBASIC2.33□□□□□ -2.04
LDLRP01130 SNORA36A-201ENST00000384221 132 ntBASIC2.33□□□□□ -2.04
LDLRP01130 Y_RNA.477-201ENST00000384352 108 ntBASIC2.33□□□□□ -2.04
LDLRP01130 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
LDLRP01130 RNU6-713P-201ENST00000384761 107 ntBASIC2.33□□□□□ -2.04
LDLRP01130 RNU6-1093P-201ENST00000391194 107 ntBASIC2.33□□□□□ -2.04
LDLRP01130 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LDLRP01130 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.33□□□□□ -2.04
LDLRP01130 RNA5SP247-201ENST00000411181 105 ntBASIC2.33□□□□□ -2.04
LDLRP01130 RPL21P38-201ENST00000418090 167 ntBASIC2.33□□□□□ -2.04
LDLRP01130 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.33□□□□□ -2.04
LDLRP01130 SUMO1P3-201ENST00000439961 304 ntBASIC2.33□□□□□ -2.04
LDLRP01130 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.33□□□□□ -2.04
LDLRP01130 snoU13.14-201ENST00000459372 104 ntBASIC2.33□□□□□ -2.04
LDLRP01130 RPL30P1-201ENST00000488676 339 ntBASIC2.33□□□□□ -2.04
LDLRP01130 CKS1BP2-201ENST00000497342 240 ntBASIC2.33□□□□□ -2.04
LDLRP01130 AC016632.1-201ENST00000503994 196 ntBASIC2.33□□□□□ -2.04
LDLRP01130 RNU6-911P-201ENST00000516523 104 ntBASIC2.33□□□□□ -2.04
LDLRP01130 SNORA31.16-201ENST00000516773 139 ntBASIC2.33□□□□□ -2.04
LDLRP01130 AC144568.1-201ENST00000520139 137 ntBASIC2.33□□□□□ -2.04
LDLRP01130 PRELID2P1-201ENST00000552837 301 ntBASIC2.33□□□□□ -2.04
LDLRP01130 AL670379.2-201ENST00000604983 252 ntBASIC2.33□□□□□ -2.04
LDLRP01130 AL356157.2-201ENST00000605122 111 ntBASIC2.33□□□□□ -2.04
LDLRP01130 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.33□□□□□ -2.04
LDLRP01130 SNORD98-201ENST00000636377 67 ntBASIC2.33□□□□□ -2.04
LDLRP01130 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LDLRP01130 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LDLRP01130 RNU4-50P-201ENST00000364361 141 ntBASIC2.32□□□□□ -2.04
LDLRP01130 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
LDLRP01130 RNU6-611P-201ENST00000384276 104 ntBASIC2.32□□□□□ -2.04
LDLRP01130 Y_RNA.552-201ENST00000384665 112 ntBASIC2.32□□□□□ -2.04
LDLRP01130 SNORA69.1-201ENST00000390904 137 ntBASIC2.32□□□□□ -2.04
LDLRP01130 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.32□□□□□ -2.04
LDLRP01130 CYCSP48-201ENST00000417124 323 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AC139712.2-201ENST00000424302 339 ntBASIC2.32□□□□□ -2.04
LDLRP01130 RPL23AP95-201ENST00000426806 265 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.32□□□□□ -2.04
LDLRP01130 MTCO3P29-201ENST00000432119 779 ntBASIC2.32□□□□□ -2.04
LDLRP01130 RPEP5-201ENST00000441137 268 ntBASIC2.32□□□□□ -2.04
LDLRP01130 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LDLRP01130 MTND4LP30-201ENST00000454092 297 ntBASIC2.32□□□□□ -2.04
LDLRP01130 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.32□□□□□ -2.04
LDLRP01130 RPL30P10-201ENST00000488148 337 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms