Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 Y_RNA.2-201ENST00000362330 96 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 SNORD50.1-201ENST00000362987 71 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 Y_RNA.184-201ENST00000363884 108 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNY1-201ENST00000364228 113 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNU6-234P-201ENST00000365229 104 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNU6-1286P-201ENST00000383871 107 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 Y_RNA.533-201ENST00000384596 114 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 SNORA26.3-201ENST00000391119 136 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 HMGN2P18-201ENST00000450680 270 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNU7-14P-201ENST00000459331 62 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
PDGFBP01127 AC103851.1-201ENST00000506833 274 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNU6-1098P-201ENST00000516772 96 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNU1-40P-201ENST00000516816 164 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNU1-97P-201ENST00000516872 164 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 AL078603.1-201ENST00000603824 313 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
PDGFBP01127 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 MIR32-201ENST00000384965 70 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 RNU1-131P-201ENST00000458943 161 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 RPL23AP75-201ENST00000491601 451 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 HMGN1P7-201ENST00000491722 313 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 MTND5P5-201ENST00000503764 376 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 PRDX4P1-201ENST00000507189 574 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 ATP5EP1-201ENST00000510257 156 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 RNU2-44P-201ENST00000516795 194 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 RNA5SP102-201ENST00000516865 106 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 EIF4A1P12-201ENST00000551910 141 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.79□□□□□ -2.12
PDGFBP01127 MIR3198-2-201ENST00000577868 80 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 FGF7P1-201ENST00000582820 288 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 AC005786.1-201ENST00000588553 154 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 AC016727.2-201ENST00000603988 621 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 RPL17P51-201ENST00000605218 238 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 MIR6779-201ENST00000617283 64 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.79□□□□□ -2.12
PDGFBP01127 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PDGFBP01127 MTND5P35-201ENST00000557537 1720 ntBASIC1.79□□□□□ -2.12
PDGFBP01127 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.78□□□□□ -2.12
PDGFBP01127 MTND5P9-201ENST00000503854 1755 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 Y_RNA.72-201ENST00000362894 103 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 Y_RNA.332-201ENST00000365271 113 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 MIR613-201ENST00000385248 95 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 AC074085.1-201ENST00000413598 418 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 RPL21P111-201ENST00000418453 477 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.78□□□□□ -2.12
PDGFBP01127 MTND1P17-201ENST00000448961 204 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 AC107399.1-201ENST00000451226 265 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.78□□□□□ -2.12
PDGFBP01127 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 RNA5SP364-201ENST00000516938 78 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 RNU6-1213P-201ENST00000517075 94 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.78□□□□□ -2.12
PDGFBP01127 AC005730.3-201ENST00000583067 366 ntBASIC1.78□□□□□ -2.12
PDGFBP01127 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.78□□□□□ -2.12
PDGFBP01127 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PDGFBP01127 RNU6-845P-201ENST00000362578 103 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 RNU5B-2P-201ENST00000363036 113 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 RNA5SP493-201ENST00000364115 91 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 RNU6-784P-201ENST00000384330 106 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 RNU6-1026P-201ENST00000384465 108 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 RNA5SP201-201ENST00000410316 124 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 RPL23AP50-201ENST00000434149 455 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.77□□□□□ -2.13
PDGFBP01127 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.77□□□□□ -2.13
PDGFBP01127 RNU6-717P-201ENST00000459076 104 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 RPL7P42-201ENST00000481005 679 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 AC027575.1-201ENST00000481064 460 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.77□□□□□ -2.13
PDGFBP01127 AC107393.1-201ENST00000512403 346 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.77□□□□□ -2.13
PDGFBP01127 MIR4255-201ENST00000579351 72 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 MIR5006-201ENST00000583027 110 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 LINC02555-201ENST00000563933 1951 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 ZNF204P-201ENST00000416749 2397 ntBASIC1.77□□□□□ -2.13
PDGFBP01127 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.77□□□□□ -2.13
PDGFBP01127 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
PDGFBP01127 RNU6-545P-201ENST00000362681 104 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RNU1-42P-201ENST00000364033 160 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RNA5SP138-201ENST00000365098 114 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 SNORD114-22-201ENST00000365423 72 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.76□□□□□ -2.13
PDGFBP01127 RNU6-842P-201ENST00000384269 107 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RNU6-601P-201ENST00000384540 107 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RNU6-331P-201ENST00000384724 107 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RNU6-1050P-201ENST00000410388 107 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RPL37P10-201ENST00000412884 288 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.76□□□□□ -2.13
PDGFBP01127 PDCL2P1-201ENST00000419302 352 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 AC123900.1-201ENST00000420390 96 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 NCOR1P3-201ENST00000420479 303 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 AL353997.1-201ENST00000432936 108 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RBMX2P4-201ENST00000441256 376 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 DAP3P1-201ENST00000441522 278 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 AC004386.2-201ENST00000441858 148 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 AC079354.2-201ENST00000453523 154 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 RPS23P5-201ENST00000495419 428 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms