Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC105137.2-201ENST00000569073 466 ntBASIC4.32□□□□□ -1.72
ALDH1A1P00352 AC012493.2-201ENST00000595083 291 ntBASIC4.32□□□□□ -1.72
ALDH1A1P00352 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.32□□□□□ -1.72
ALDH1A1P00352 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.32□□□□□ -1.72
ALDH1A1P00352 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ALDH1A1P00352 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ALDH1A1P00352 AC004944.1-201ENST00000517807 3059 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ALDH1A1P00352 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ALDH1A1P00352 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ALDH1A1P00352 SNORD9-201ENST00000362566 104 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 Y_RNA.510-201ENST00000384511 114 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 MIR195-201ENST00000385194 87 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 AC002075.2-201ENST00000425207 252 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 NDUFB1P1-201ENST00000435191 180 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 AF228730.3-201ENST00000436691 102 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 snoU13.14-201ENST00000459372 104 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 RN7SL585P-201ENST00000470538 280 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 RNU6-65P-201ENST00000516332 98 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.31□□□□□ -1.72
ALDH1A1P00352 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.31□□□□□ -1.72
ALDH1A1P00352 AC105245.1-201ENST00000581934 244 ntBASIC4.31□□□□□ -1.72
ALDH1A1P00352 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ALDH1A1P00352 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ALDH1A1P00352 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ALDH1A1P00352 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ALDH1A1P00352 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ALDH1A1P00352 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALDH1A1P00352 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.3□□□□□ -1.72
ALDH1A1P00352 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALDH1A1P00352 Y_RNA.49-201ENST00000362714 112 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ALDH1A1P00352 MIR1289-1-201ENST00000408836 144 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 RNA5SP239-201ENST00000410218 129 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.3□□□□□ -1.72
ALDH1A1P00352 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.3□□□□□ -1.72
ALDH1A1P00352 RPS26P55-201ENST00000471178 356 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 AC145146.1-201ENST00000496370 254 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 ATP5EP1-201ENST00000510257 156 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 RNA5SP236-201ENST00000516169 116 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 RNU6-109P-201ENST00000516364 107 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 RNU6-184P-201ENST00000516514 107 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 RNU6-365P-201ENST00000517113 106 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 uc_338.4-201ENST00000616635 176 ntBASIC4.3□□□□□ -1.72
ALDH1A1P00352 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALDH1A1P00352 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.3□□□□□ -1.72
ALDH1A1P00352 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.3□□□□□ -1.72
ALDH1A1P00352 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ALDH1A1P00352 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.3□□□□□ -1.72
ALDH1A1P00352 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALDH1A1P00352 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.29□□□□□ -1.72
ALDH1A1P00352 SNORA27.1-201ENST00000362604 124 ntBASIC4.29□□□□□ -1.72
ALDH1A1P00352 MIR586-201ENST00000385035 97 ntBASIC4.29□□□□□ -1.72
ALDH1A1P00352 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.29□□□□□ -1.72
ALDH1A1P00352 COX6CP6-201ENST00000490840 228 ntBASIC4.29□□□□□ -1.72
ALDH1A1P00352 RNU6-1146P-201ENST00000516282 102 ntBASIC4.29□□□□□ -1.72
ALDH1A1P00352 RNU6-158P-201ENST00000517104 100 ntBASIC4.29□□□□□ -1.72
ALDH1A1P00352 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.29□□□□□ -1.72
ALDH1A1P00352 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.29□□□□□ -1.72
ALDH1A1P00352 AL365205.2-201ENST00000594586 68 ntBASIC4.29□□□□□ -1.72
ALDH1A1P00352 SNORA62.6-201ENST00000606322 83 ntBASIC4.29□□□□□ -1.72
ALDH1A1P00352 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.29□□□□□ -1.72
ALDH1A1P00352 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
ALDH1A1P00352 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALDH1A1P00352 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ALDH1A1P00352 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
ALDH1A1P00352 SNORA1.3-201ENST00000384676 136 ntBASIC4.28□□□□□ -1.72
ALDH1A1P00352 MIR590-201ENST00000385008 97 ntBASIC4.28□□□□□ -1.72
ALDH1A1P00352 AL590004.2-201ENST00000404787 371 ntBASIC4.28□□□□□ -1.72
ALDH1A1P00352 RNU6-1073P-201ENST00000517182 106 ntBASIC4.28□□□□□ -1.72
ALDH1A1P00352 MIR4325-201ENST00000583049 90 ntBASIC4.28□□□□□ -1.72
ALDH1A1P00352 AL591424.2-201ENST00000617023 128 ntBASIC4.28□□□□□ -1.72
ALDH1A1P00352 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ALDH1A1P00352 AC093908.1-201ENST00000623125 8092 ntBASIC4.28□□□□□ -1.72
ALDH1A1P00352 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ALDH1A1P00352 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ALDH1A1P00352 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
ALDH1A1P00352 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
ALDH1A1P00352 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 AL356292.1-201ENST00000283110 373 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 SNORA63.5-201ENST00000363548 123 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 RNU6-1305P-201ENST00000364353 104 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 MTATP8P2-201ENST00000435212 202 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 AC010531.2-201ENST00000465012 153 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 AC007751.1-201ENST00000529260 376 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.27□□□□□ -1.73
ALDH1A1P00352 AL137849.1-201ENST00000604767 169 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 Y_RNA.818-201ENST00000618813 71 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ALDH1A1P00352 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.27□□□□□ -1.73
ALDH1A1P00352 AC007656.2-201ENST00000624902 4547 ntBASIC4.27□□□□□ -1.73
ALDH1A1P00352 AC000403.1-201ENST00000613696 3585 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms