Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 RN7SL636P-201ENST00000497504 294 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.07□□□□□ -2.08
CLPTM1O96005 AC026436.1-201ENST00000510537 270 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 MIR449C-201ENST00000516047 92 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 RNU6-58P-201ENST00000517143 103 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 AC021269.2-201ENST00000532318 330 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 AC090617.3-201ENST00000573670 475 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 AL138963.2-201ENST00000605137 226 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 AC046143.2-201ENST00000609789 160 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 AL132822.1-201ENST00000617063 513 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 MIR1291-201ENST00000627649 87 ntBASIC2.07□□□□□ -2.08
CLPTM1O96005 AC005592.1-201ENST00000566527 1640 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 RNU1-23P-201ENST00000363361 144 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 U3.9-201ENST00000363823 204 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 RNU6-450P-201ENST00000364654 107 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 RNA5SP125-201ENST00000364843 120 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 SNORA18.2-201ENST00000383865 132 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 RNU6-708P-201ENST00000384217 107 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 SNORA67.4-201ENST00000384688 142 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 MIR10B-201ENST00000385011 110 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 MIR29B2-201ENST00000385055 81 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 MRPL42P3-201ENST00000401492 326 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 AC114482.1-201ENST00000418010 247 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.06□□□□□ -2.08
CLPTM1O96005 CKS1BP2-201ENST00000497342 240 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 AC234781.5-201ENST00000508429 271 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 SNORA25.10-201ENST00000515926 124 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 RNU6-1114P-201ENST00000516022 107 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 RNU6-965P-201ENST00000516721 96 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 RNU6-1137P-201ENST00000517073 99 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 AC022868.1-201ENST00000517767 391 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 CBX3P7-201ENST00000532876 502 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.06□□□□□ -2.08
CLPTM1O96005 EIF4A1P12-201ENST00000551910 141 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 HSBP1P1-201ENST00000555205 166 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 AC090517.1-201ENST00000569307 266 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 MIR4680-201ENST00000580906 66 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 MIR5188-201ENST00000583467 113 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
CLPTM1O96005 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.06□□□□□ -2.08
CLPTM1O96005 RNA5SP361-201ENST00000362686 118 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 RNU6-873P-201ENST00000363833 107 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 SNORD115-8-201ENST00000363856 82 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 SNORD32B-201ENST00000364460 84 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 SNORD115-38-201ENST00000365037 82 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 Y_RNA.527-201ENST00000384573 102 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 RNU6-159P-201ENST00000391080 106 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 RNU1-139P-201ENST00000391307 165 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 AC004866.1-201ENST00000411748 78 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 AC113618.1-201ENST00000416747 285 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 AC027124.2-201ENST00000428249 105 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 AC107032.1-201ENST00000485945 480 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 AC132942.1-201ENST00000486753 483 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.05□□□□□ -2.08
CLPTM1O96005 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.05□□□□□ -2.08
CLPTM1O96005 AC125232.2-201ENST00000592457 143 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 MIR5739-201ENST00000619803 80 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 AC016717.2-201ENST00000609089 5141 ntBASIC2.05□□□□□ -2.08
CLPTM1O96005 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLPTM1O96005 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLPTM1O96005 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLPTM1O96005 RNU6-879P-201ENST00000364328 108 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 RNU6-639P-201ENST00000384074 107 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 MIR606-201ENST00000384851 96 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CLPTM1O96005 Y_RNA.645-201ENST00000391229 102 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CLPTM1O96005 RNU6-1001P-201ENST00000411265 100 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 EIF1P2-201ENST00000428233 350 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.04□□□□□ -2.08
CLPTM1O96005 AC112492.4-201ENST00000456549 352 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 RNU2-19P-201ENST00000517288 84 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.04□□□□□ -2.08
CLPTM1O96005 AC093023.1-201ENST00000547375 507 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 VN1R91P-201ENST00000594377 169 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 AC103810.6-201ENST00000606708 136 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
CLPTM1O96005 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.08
CLPTM1O96005 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
CLPTM1O96005 RNA5SP213-201ENST00000391031 106 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.03□□□□□ -2.08
CLPTM1O96005 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.03□□□□□ -2.08
CLPTM1O96005 AL161788.1-201ENST00000441805 169 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 AC096638.1-201ENST00000444678 216 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 MTCO3P8-201ENST00000453691 755 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 AC007215.1-201ENST00000464893 276 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 RN7SL274P-201ENST00000492268 272 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 SNORA25.14-201ENST00000516481 132 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.03□□□□□ -2.08
CLPTM1O96005 GNAI2P1-201ENST00000541815 315 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.03□□□□□ -2.08
CLPTM1O96005 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.03□□□□□ -2.08
CLPTM1O96005 AC006504.6-201ENST00000590142 199 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 AC104695.3-201ENST00000604052 296 ntBASIC2.03□□□□□ -2.08
CLPTM1O96005 AL360085.1-201ENST00000604713 532 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms