Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MIR1244-2-201ENST00000636449 85 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR1244-4-202ENST00000636813 85 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CLDN1O95832 Y_RNA.106-201ENST00000363189 100 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 U3.9-201ENST00000363823 204 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 RNU6-944P-201ENST00000364023 107 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 Y_RNA.796-201ENST00000364268 102 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 Y_RNA.799-201ENST00000364992 102 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 RNU6-1032P-201ENST00000384100 107 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 RNU6-159P-201ENST00000391080 106 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 Y_RNA.592-201ENST00000410274 109 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 AC092423.1-201ENST00000430165 186 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 CBX3P6-201ENST00000430257 527 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN1O95832 AP000870.1-201ENST00000472927 406 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN1O95832 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.98□□□□□ -2.09
CLDN1O95832 RNU6-1114P-201ENST00000516022 107 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 RNU6-1198P-201ENST00000516904 67 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 RNA5SP54-201ENST00000516951 92 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 RNU6-58P-201ENST00000517143 103 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 RNU6-586P-201ENST00000517265 104 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 DEFB131C-201ENST00000528817 165 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 AC026470.2-201ENST00000561492 181 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 AC090617.3-201ENST00000573670 475 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 AL138963.2-201ENST00000605137 226 ntBASIC1.98□□□□□ -2.09
CLDN1O95832 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CLDN1O95832 MIR21-201ENST00000362134 72 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 MIRLET7G-201ENST00000362280 84 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 Y_RNA.80-201ENST00000362996 102 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 RNA5SP240-201ENST00000365355 128 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 SNORA22B-201ENST00000383876 138 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 RNU6-245P-201ENST00000384020 107 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 MIR10B-201ENST00000385011 110 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 RNU6-308P-201ENST00000390957 107 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 SNORA17.3-201ENST00000391159 129 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 EIF1P2-201ENST00000428233 350 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AC018634.1-201ENST00000437554 401 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AL161788.1-201ENST00000441805 169 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN1O95832 AC112492.4-201ENST00000456549 352 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 CYP2C59P-201ENST00000457790 269 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 MIR2355-201ENST00000517199 87 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN1O95832 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN1O95832 AC022432.1-201ENST00000595739 310 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AC092447.9-201ENST00000603395 144 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AC016727.2-201ENST00000603988 621 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 RPL17P51-201ENST00000605218 238 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 SNORD58B-201ENST00000607313 66 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN1O95832 AC007485.1-201ENST00000616755 206 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AL449363.1-201ENST00000617815 186 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AL138825.1-201ENST00000618587 192 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AC008121.3-201ENST00000618726 433 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 AL606534.2-204ENST00000635008 178 ntBASIC1.97□□□□□ -2.09
CLDN1O95832 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN1O95832 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN1O95832 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN1O95832 RNU6-222P-201ENST00000362438 107 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 RNU1-76P-201ENST00000362903 159 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 Y_RNA.216-201ENST00000364205 93 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 RNA5SP125-201ENST00000364843 120 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 MIR499A-201ENST00000384903 122 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 SNORA69.1-201ENST00000390904 137 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 SNORA12-201ENST00000391162 147 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 RNU6-321P-201ENST00000410912 106 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AL590556.1-201ENST00000423231 483 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN1O95832 USP9YP16-201ENST00000430287 407 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN1O95832 RPS15AP28-201ENST00000435088 386 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 USP9YP23-201ENST00000455085 407 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN1O95832 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN1O95832 SNORA40.14-201ENST00000516543 86 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AC144568.1-201ENST00000520139 137 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AC023442.1-201ENST00000531247 422 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AP003072.1-201ENST00000531740 145 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 GNAI2P1-201ENST00000541815 315 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN1O95832 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AC245884.12-201ENST00000615364 59 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 MIR8070-201ENST00000616510 88 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 AC007742.2-201ENST00000618226 398 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 U4atac.1-201ENST00000618345 95 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN1O95832 AC099654.10-201ENST00000640395 161 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 MTND5P16-201ENST00000460269 1703 ntBASIC1.96□□□□□ -2.1
CLDN1O95832 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN1O95832 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.39-201ENST00000362620 98 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 RNU1-23P-201ENST00000363361 144 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 SNORA63-201ENST00000363450 132 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.314-201ENST00000365114 102 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 SNORA33.2-201ENST00000365413 134 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.557-201ENST00000384680 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms