Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 ZNF299P-201ENST00000406845 1804 ntBASIC2.21□□□□□ -2.05
DDX58O95786 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
DDX58O95786 Y_RNA.166-201ENST00000363730 102 ntBASIC2.21□□□□□ -2.06
DDX58O95786 SNORD114-6-201ENST00000364393 72 ntBASIC2.21□□□□□ -2.06
DDX58O95786 RNA5SP190-201ENST00000365222 118 ntBASIC2.21□□□□□ -2.06
DDX58O95786 RNU6-1283P-201ENST00000365314 105 ntBASIC2.21□□□□□ -2.06
DDX58O95786 Y_RNA.339-201ENST00000365325 102 ntBASIC2.21□□□□□ -2.06
DDX58O95786 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.21□□□□□ -2.06
DDX58O95786 MIR300-201ENST00000401138 83 ntBASIC2.21□□□□□ -2.06
DDX58O95786 SUMO2P12-201ENST00000405924 140 ntBASIC2.21□□□□□ -2.06
DDX58O95786 MTCO3P8-201ENST00000453691 755 ntBASIC2.21□□□□□ -2.06
DDX58O95786 MTND4P17-201ENST00000470444 350 ntBASIC2.21□□□□□ -2.06
DDX58O95786 HMGN1P12-201ENST00000499125 195 ntBASIC2.21□□□□□ -2.06
DDX58O95786 RNU6-1198P-201ENST00000516904 67 ntBASIC2.21□□□□□ -2.06
DDX58O95786 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.21□□□□□ -2.06
DDX58O95786 DEFB131C-201ENST00000528817 165 ntBASIC2.21□□□□□ -2.06
DDX58O95786 AL590705.4-201ENST00000532209 134 ntBASIC2.21□□□□□ -2.06
DDX58O95786 MIR502-201ENST00000606349 86 ntBASIC2.21□□□□□ -2.06
DDX58O95786 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
DDX58O95786 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.21□□□□□ -2.06
DDX58O95786 AC099654.5-201ENST00000636479 350 ntBASIC2.21□□□□□ -2.06
DDX58O95786 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.21□□□□□ -2.06
DDX58O95786 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
DDX58O95786 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
DDX58O95786 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
DDX58O95786 RNA5SP489-201ENST00000410986 109 ntBASIC2.2□□□□□ -2.06
DDX58O95786 RNA5SP501-201ENST00000410990 112 ntBASIC2.2□□□□□ -2.06
DDX58O95786 AL445305.1-201ENST00000432577 575 ntBASIC2.2□□□□□ -2.06
DDX58O95786 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.2□□□□□ -2.06
DDX58O95786 RNU1-131P-201ENST00000458943 161 ntBASIC2.2□□□□□ -2.06
DDX58O95786 RN7SKP210-201ENST00000459176 261 ntBASIC2.2□□□□□ -2.06
DDX58O95786 AC007215.1-201ENST00000464893 276 ntBASIC2.2□□□□□ -2.06
DDX58O95786 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.2□□□□□ -2.06
DDX58O95786 RNA5SP458-201ENST00000516188 119 ntBASIC2.2□□□□□ -2.06
DDX58O95786 Y_RNA.670-201ENST00000516255 105 ntBASIC2.2□□□□□ -2.06
DDX58O95786 RNA5SP54-201ENST00000516951 92 ntBASIC2.2□□□□□ -2.06
DDX58O95786 AC087441.2-201ENST00000529141 262 ntBASIC2.2□□□□□ -2.06
DDX58O95786 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.2□□□□□ -2.06
DDX58O95786 CBX3P8-201ENST00000532412 525 ntBASIC2.2□□□□□ -2.06
DDX58O95786 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.2□□□□□ -2.06
DDX58O95786 MIR4801-201ENST00000582704 82 ntBASIC2.2□□□□□ -2.06
DDX58O95786 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.2□□□□□ -2.06
DDX58O95786 AC005296.1-201ENST00000616145 209 ntBASIC2.2□□□□□ -2.06
DDX58O95786 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
DDX58O95786 SNORD115-32-201ENST00000364079 82 ntBASIC2.19□□□□□ -2.06
DDX58O95786 Y_RNA.319-201ENST00000365138 92 ntBASIC2.19□□□□□ -2.06
DDX58O95786 Y_RNA.405-201ENST00000383979 100 ntBASIC2.19□□□□□ -2.06
DDX58O95786 Y_RNA.451-201ENST00000384200 100 ntBASIC2.19□□□□□ -2.06
DDX58O95786 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
DDX58O95786 U8.10-201ENST00000384260 133 ntBASIC2.19□□□□□ -2.06
DDX58O95786 Y_RNA.524-201ENST00000384564 100 ntBASIC2.19□□□□□ -2.06
DDX58O95786 Y_RNA.561-201ENST00000384694 100 ntBASIC2.19□□□□□ -2.06
DDX58O95786 SNORA12.2-201ENST00000391040 156 ntBASIC2.19□□□□□ -2.06
DDX58O95786 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.19□□□□□ -2.06
DDX58O95786 NCOR1P3-201ENST00000420479 303 ntBASIC2.19□□□□□ -2.06
DDX58O95786 AC243428.1-201ENST00000421099 264 ntBASIC2.19□□□□□ -2.06
DDX58O95786 AC244636.1-201ENST00000421152 228 ntBASIC2.19□□□□□ -2.06
DDX58O95786 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
DDX58O95786 Y_RNA.635-201ENST00000459041 101 ntBASIC2.19□□□□□ -2.06
DDX58O95786 RPL7P42-201ENST00000481005 679 ntBASIC2.19□□□□□ -2.06
DDX58O95786 RPL30P10-201ENST00000488148 337 ntBASIC2.19□□□□□ -2.06
DDX58O95786 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.19□□□□□ -2.06
DDX58O95786 MRPS17P9-201ENST00000511924 393 ntBASIC2.19□□□□□ -2.06
DDX58O95786 SUMO2P18-201ENST00000518873 252 ntBASIC2.19□□□□□ -2.06
DDX58O95786 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.19□□□□□ -2.06
DDX58O95786 MIR3169-201ENST00000578032 83 ntBASIC2.19□□□□□ -2.06
DDX58O95786 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.19□□□□□ -2.06
DDX58O95786 MIR3618-201ENST00000580330 88 ntBASIC2.19□□□□□ -2.06
DDX58O95786 AL355073.2-201ENST00000612106 557 ntBASIC2.19□□□□□ -2.06
DDX58O95786 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
DDX58O95786 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.19□□□□□ -2.06
DDX58O95786 SNORA72.1-201ENST00000363485 129 ntBASIC2.18□□□□□ -2.06
DDX58O95786 RNU6-595P-201ENST00000363944 107 ntBASIC2.18□□□□□ -2.06
DDX58O95786 USMG5P1-201ENST00000425964 177 ntBASIC2.18□□□□□ -2.06
DDX58O95786 MTCO3P29-201ENST00000432119 779 ntBASIC2.18□□□□□ -2.06
DDX58O95786 AC074290.1-201ENST00000448883 135 ntBASIC2.18□□□□□ -2.06
DDX58O95786 AC016925.1-201ENST00000458303 298 ntBASIC2.18□□□□□ -2.06
DDX58O95786 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.18□□□□□ -2.06
DDX58O95786 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX58O95786 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX58O95786 RRN3P3-201ENST00000549207 578 ntBASIC2.18□□□□□ -2.06
DDX58O95786 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX58O95786 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX58O95786 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX58O95786 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.18□□□□□ -2.06
DDX58O95786 AC005786.1-201ENST00000588553 154 ntBASIC2.18□□□□□ -2.06
DDX58O95786 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.18□□□□□ -2.06
DDX58O95786 AC083806.3-201ENST00000614016 455 ntBASIC2.18□□□□□ -2.06
DDX58O95786 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.18□□□□□ -2.06
DDX58O95786 BX322639.1-202ENST00000423987 2213 ntBASIC2.18□□□□□ -2.06
DDX58O95786 RNU6-1305P-201ENST00000364353 104 ntBASIC2.17□□□□□ -2.06
DDX58O95786 SNORA8-201ENST00000384574 139 ntBASIC2.17□□□□□ -2.06
DDX58O95786 RNU6-331P-201ENST00000384724 107 ntBASIC2.17□□□□□ -2.06
DDX58O95786 SNORA75.4-201ENST00000391278 119 ntBASIC2.17□□□□□ -2.06
DDX58O95786 AL353997.1-201ENST00000432936 108 ntBASIC2.17□□□□□ -2.06
DDX58O95786 AC114982.1-201ENST00000469402 321 ntBASIC2.17□□□□□ -2.06
DDX58O95786 SNORA25.14-201ENST00000516481 132 ntBASIC2.17□□□□□ -2.06
DDX58O95786 Y_RNA.706-201ENST00000516933 99 ntBASIC2.17□□□□□ -2.06
DDX58O95786 RNU6-58P-201ENST00000517143 103 ntBASIC2.17□□□□□ -2.06
DDX58O95786 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms