Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC018462.2-201ENST00000605375 395 ntBASIC2.16□□□□□ -2.06
MBD4O95243 MIR8081-201ENST00000611533 95 ntBASIC2.16□□□□□ -2.06
MBD4O95243 AL359757.2-201ENST00000624309 274 ntBASIC2.16□□□□□ -2.06
MBD4O95243 AC022513.1-201ENST00000624512 117 ntBASIC2.16□□□□□ -2.06
MBD4O95243 AC008873.1-201ENST00000625051 138 ntBASIC2.16□□□□□ -2.06
MBD4O95243 RNU6-595P-201ENST00000363944 107 ntBASIC2.15□□□□□ -2.07
MBD4O95243 RNU6-1305P-201ENST00000364353 104 ntBASIC2.15□□□□□ -2.07
MBD4O95243 RNU6-418P-201ENST00000384035 107 ntBASIC2.15□□□□□ -2.07
MBD4O95243 RNU6-975P-201ENST00000384296 105 ntBASIC2.15□□□□□ -2.07
MBD4O95243 RNU6-1235P-201ENST00000384559 107 ntBASIC2.15□□□□□ -2.07
MBD4O95243 MIR548F5-201ENST00000408421 86 ntBASIC2.15□□□□□ -2.07
MBD4O95243 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
MBD4O95243 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.15□□□□□ -2.07
MBD4O95243 RPS3AP52-201ENST00000435639 297 ntBASIC2.15□□□□□ -2.07
MBD4O95243 RNU6-498P-201ENST00000459468 107 ntBASIC2.15□□□□□ -2.07
MBD4O95243 AC108210.2-201ENST00000503681 201 ntBASIC2.15□□□□□ -2.07
MBD4O95243 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
MBD4O95243 AC107393.1-201ENST00000512403 346 ntBASIC2.15□□□□□ -2.07
MBD4O95243 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.15□□□□□ -2.07
MBD4O95243 AC134698.4-201ENST00000523451 826 ntBASIC2.15□□□□□ -2.07
MBD4O95243 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.15□□□□□ -2.07
MBD4O95243 AC027288.2-201ENST00000553028 243 ntBASIC2.15□□□□□ -2.07
MBD4O95243 AC104581.2-201ENST00000572227 430 ntBASIC2.15□□□□□ -2.07
MBD4O95243 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.15□□□□□ -2.07
MBD4O95243 RNU1-62P-201ENST00000362599 164 ntBASIC2.14□□□□□ -2.07
MBD4O95243 RNU6-1059P-201ENST00000363752 98 ntBASIC2.14□□□□□ -2.07
MBD4O95243 RNU6-842P-201ENST00000384269 107 ntBASIC2.14□□□□□ -2.07
MBD4O95243 RNA5SP100-201ENST00000410903 110 ntBASIC2.14□□□□□ -2.07
MBD4O95243 RNA5SP59-201ENST00000410922 110 ntBASIC2.14□□□□□ -2.07
MBD4O95243 USMG5P1-201ENST00000425964 177 ntBASIC2.14□□□□□ -2.07
MBD4O95243 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.14□□□□□ -2.07
MBD4O95243 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.14□□□□□ -2.07
MBD4O95243 RNU6-548P-201ENST00000517083 115 ntBASIC2.14□□□□□ -2.07
MBD4O95243 AP003033.1-201ENST00000527244 415 ntBASIC2.14□□□□□ -2.07
MBD4O95243 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
MBD4O95243 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.14□□□□□ -2.07
MBD4O95243 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.14□□□□□ -2.07
MBD4O95243 AL078596.1-201ENST00000624856 447 ntBASIC2.14□□□□□ -2.07
MBD4O95243 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MBD4O95243 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
MBD4O95243 Y_RNA.160-201ENST00000363677 92 ntBASIC2.13□□□□□ -2.07
MBD4O95243 RNU6-280P-201ENST00000364145 104 ntBASIC2.13□□□□□ -2.07
MBD4O95243 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.13□□□□□ -2.07
MBD4O95243 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.13□□□□□ -2.07
MBD4O95243 RPL31P58-201ENST00000469001 379 ntBASIC2.13□□□□□ -2.07
MBD4O95243 AC026782.1-201ENST00000512952 449 ntBASIC2.13□□□□□ -2.07
MBD4O95243 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
MBD4O95243 AC010900.2-201ENST00000604508 210 ntBASIC2.13□□□□□ -2.07
MBD4O95243 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.13□□□□□ -2.07
MBD4O95243 DUXAP9-208ENST00000622815 614 ntBASIC2.13□□□□□ -2.07
MBD4O95243 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MBD4O95243 Y_RNA.279-201ENST00000364763 95 ntBASIC2.12□□□□□ -2.07
MBD4O95243 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
MBD4O95243 FGF7P8-201ENST00000402994 292 ntBASIC2.12□□□□□ -2.07
MBD4O95243 RPL37P10-201ENST00000412884 288 ntBASIC2.12□□□□□ -2.07
MBD4O95243 HMGB1P18-201ENST00000438801 619 ntBASIC2.12□□□□□ -2.07
MBD4O95243 SNORA25.14-201ENST00000516481 132 ntBASIC2.12□□□□□ -2.07
MBD4O95243 MIR5094-201ENST00000578766 85 ntBASIC2.12□□□□□ -2.07
MBD4O95243 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.12□□□□□ -2.07
MBD4O95243 MIR3935-201ENST00000583472 104 ntBASIC2.12□□□□□ -2.07
MBD4O95243 AC012493.3-201ENST00000604494 112 ntBASIC2.12□□□□□ -2.07
MBD4O95243 AC069114.2-201ENST00000604699 304 ntBASIC2.12□□□□□ -2.07
MBD4O95243 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.12□□□□□ -2.07
MBD4O95243 AC100812.1-201ENST00000607622 580 ntBASIC2.12□□□□□ -2.07
MBD4O95243 AL353149.1-201ENST00000610667 244 ntBASIC2.12□□□□□ -2.07
MBD4O95243 uc_338.5-201ENST00000611839 155 ntBASIC2.12□□□□□ -2.07
MBD4O95243 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.12□□□□□ -2.07
MBD4O95243 Y_RNA.166-201ENST00000363730 102 ntBASIC2.11□□□□□ -2.07
MBD4O95243 RNU6-873P-201ENST00000363833 107 ntBASIC2.11□□□□□ -2.07
MBD4O95243 RNA5SP99-201ENST00000364020 114 ntBASIC2.11□□□□□ -2.07
MBD4O95243 Y_RNA.339-201ENST00000365325 102 ntBASIC2.11□□□□□ -2.07
MBD4O95243 RNU6-601P-201ENST00000384540 107 ntBASIC2.11□□□□□ -2.07
MBD4O95243 RNU6-159P-201ENST00000391080 106 ntBASIC2.11□□□□□ -2.07
MBD4O95243 AL627390.1-201ENST00000396055 340 ntBASIC2.11□□□□□ -2.07
MBD4O95243 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.11□□□□□ -2.07
MBD4O95243 AC112492.4-201ENST00000456549 352 ntBASIC2.11□□□□□ -2.07
MBD4O95243 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.11□□□□□ -2.07
MBD4O95243 RNU7-30P-201ENST00000516835 62 ntBASIC2.11□□□□□ -2.07
MBD4O95243 Y_RNA.706-201ENST00000516933 99 ntBASIC2.11□□□□□ -2.07
MBD4O95243 Y_RNA.708-201ENST00000516950 96 ntBASIC2.11□□□□□ -2.07
MBD4O95243 RNU6-250P-201ENST00000516958 103 ntBASIC2.11□□□□□ -2.07
MBD4O95243 MIR4419B-201ENST00000577260 68 ntBASIC2.11□□□□□ -2.07
MBD4O95243 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
MBD4O95243 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
MBD4O95243 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MBD4O95243 MTND4P12-201ENST00000498999 1377 ntBASIC2.1□□□□□ -2.07
MBD4O95243 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MBD4O95243 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
MBD4O95243 RNU6-845P-201ENST00000362578 103 ntBASIC2.1□□□□□ -2.07
MBD4O95243 Y_RNA.405-201ENST00000383979 100 ntBASIC2.1□□□□□ -2.07
MBD4O95243 Y_RNA.451-201ENST00000384200 100 ntBASIC2.1□□□□□ -2.07
MBD4O95243 SNORA67.2-201ENST00000384300 149 ntBASIC2.1□□□□□ -2.07
MBD4O95243 Y_RNA.482-201ENST00000384377 111 ntBASIC2.1□□□□□ -2.07
MBD4O95243 Y_RNA.524-201ENST00000384564 100 ntBASIC2.1□□□□□ -2.07
MBD4O95243 Y_RNA.561-201ENST00000384694 100 ntBASIC2.1□□□□□ -2.07
MBD4O95243 RNU6-876P-201ENST00000391295 104 ntBASIC2.1□□□□□ -2.07
MBD4O95243 RNU6-1050P-201ENST00000410388 107 ntBASIC2.1□□□□□ -2.07
MBD4O95243 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
MBD4O95243 AC016717.1-201ENST00000448918 286 ntBASIC2.1□□□□□ -2.07
MBD4O95243 RNU7-57P-201ENST00000459540 60 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms