Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC010680.1-201ENST00000590024 3590 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL5O76039 ZNF204P-201ENST00000416749 2397 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.94□□□□□ -1.94
CDKL5O76039 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.94□□□□□ -1.94
CDKL5O76039 AC062016.1-201ENST00000355719 319 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 Y_RNA.40-201ENST00000362645 93 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 Y_RNA.76-201ENST00000362931 109 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 Y_RNA.111-201ENST00000363248 100 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 RNU6-748P-201ENST00000384648 107 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 RNU6-21P-201ENST00000384710 107 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AL033519.2-201ENST00000403958 392 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 RNU2-52P-201ENST00000410680 190 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 RNU5A-5P-201ENST00000411054 116 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.94□□□□□ -1.94
CDKL5O76039 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.94□□□□□ -1.94
CDKL5O76039 RPL23AP3-201ENST00000453844 468 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AL049873.1-201ENST00000480540 376 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.94□□□□□ -1.94
CDKL5O76039 RNA5SP356-201ENST00000515972 94 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 Y_RNA.700-201ENST00000516806 100 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 RNA5SP54-201ENST00000516951 92 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 RNU6-182P-201ENST00000516970 105 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.94□□□□□ -1.94
CDKL5O76039 RRN3P3-201ENST00000549207 578 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.94□□□□□ -1.94
CDKL5O76039 MIR4319-201ENST00000577285 85 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.94□□□□□ -1.94
CDKL5O76039 RPS15AP11-201ENST00000594193 385 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AC010999.1-201ENST00000611856 324 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 AL138880.2-201ENST00000616214 239 ntBASIC2.94□□□□□ -1.94
CDKL5O76039 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
CDKL5O76039 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CDKL5O76039 AC135776.4-201ENST00000624300 1904 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CDKL5O76039 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.93□□□□□ -1.94
CDKL5O76039 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.93□□□□□ -1.94
CDKL5O76039 AC010889.1-201ENST00000566193 2666 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 Y_RNA.44-201ENST00000362676 108 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 RNA5SP456-201ENST00000364002 114 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 Y_RNA.200-201ENST00000364018 102 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 RNU6-1062P-201ENST00000383908 107 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 MIR27B-201ENST00000385129 97 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 SNORA53-201ENST00000391141 249 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 MIR1298-201ENST00000408783 112 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 RNA5SP184-201ENST00000411071 108 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 CYCSP48-201ENST00000417124 323 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL5O76039 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL5O76039 RNU5F-2P-201ENST00000516066 82 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 RNU2-31P-201ENST00000516954 155 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 AC115990.1-201ENST00000526957 301 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 AC055872.1-201ENST00000570978 278 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL5O76039 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL5O76039 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL5O76039 MZT1P2-201ENST00000604387 248 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 SCARNA15.3-201ENST00000626315 122 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 SCARNA4.1-201ENST00000628597 123 ntBASIC2.93□□□□□ -1.94
CDKL5O76039 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDKL5O76039 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDKL5O76039 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CDKL5O76039 Y_RNA.29-201ENST00000362570 113 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 RNU6-529P-201ENST00000363383 104 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 SNORA25.6-201ENST00000364121 118 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 RNU6-1175P-201ENST00000365200 107 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 RNU6-326P-201ENST00000365480 107 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 DEFA7P-201ENST00000382676 285 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 Y_RNA.446-201ENST00000384178 104 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 Y_RNA.569-201ENST00000384749 103 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 MIR196B-201ENST00000384852 84 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.92□□□□□ -1.94
CDKL5O76039 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.92□□□□□ -1.94
CDKL5O76039 SNORA25.14-201ENST00000516481 132 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 CYP4A27P-201ENST00000567218 190 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 MIR5194-201ENST00000582634 120 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 AC004792.1-201ENST00000614523 137 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 FTX_2.1-201ENST00000618816 94 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 IGHVIII-44-202ENST00000636235 289 ntBASIC2.92□□□□□ -1.94
CDKL5O76039 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.92□□□□□ -1.94
CDKL5O76039 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CDKL5O76039 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.92□□□□□ -1.94
CDKL5O76039 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CDKL5O76039 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDKL5O76039 Y_RNA.150-201ENST00000363562 102 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 Y_RNA.555-201ENST00000384673 110 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 MIR208B-201ENST00000401172 77 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 Y_RNA.595-201ENST00000410403 105 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 AC007215.1-201ENST00000464893 276 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 RNU6-966P-201ENST00000516479 104 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 Y_RNA.683-201ENST00000516508 93 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.91□□□□□ -1.94
CDKL5O76039 AC105137.2-201ENST00000569073 466 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 MIR3136-201ENST00000583498 78 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.91□□□□□ -1.94
CDKL5O76039 AC005176.2-201ENST00000596933 147 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 AL356575.1-201ENST00000603008 283 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 AL034555.1-201ENST00000604816 211 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 U4.3-201ENST00000621047 82 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms