Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF40O75150 RNU5F-4P-201ENST00000516581 114 ntBASIC4.47□□□□□ -1.69
RNF40O75150 AC079587.1-201ENST00000603846 277 ntBASIC4.47□□□□□ -1.69
RNF40O75150 AL110115.1-201ENST00000614396 364 ntBASIC4.47□□□□□ -1.69
RNF40O75150 U6.73-201ENST00000619194 103 ntBASIC4.47□□□□□ -1.69
RNF40O75150 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF40O75150 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF40O75150 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF40O75150 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF40O75150 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RNF40O75150 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF40O75150 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF40O75150 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RNF40O75150 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF40O75150 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.46□□□□□ -1.69
RNF40O75150 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RNF40O75150 RNU6-888P-201ENST00000363010 101 ntBASIC4.46□□□□□ -1.7
RNF40O75150 RNA5SP283-201ENST00000365604 119 ntBASIC4.46□□□□□ -1.7
RNF40O75150 MIR548A2-201ENST00000384956 97 ntBASIC4.46□□□□□ -1.7
RNF40O75150 SNORD66.1-201ENST00000391230 76 ntBASIC4.46□□□□□ -1.7
RNF40O75150 AC008134.1-201ENST00000420943 193 ntBASIC4.46□□□□□ -1.7
RNF40O75150 RPL30P4-201ENST00000429309 333 ntBASIC4.46□□□□□ -1.7
RNF40O75150 PGBD4P5-201ENST00000445958 426 ntBASIC4.46□□□□□ -1.7
RNF40O75150 RNU6-893P-201ENST00000458841 100 ntBASIC4.46□□□□□ -1.7
RNF40O75150 RPS26P48-201ENST00000491713 339 ntBASIC4.46□□□□□ -1.7
RNF40O75150 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF40O75150 AC141557.1-201ENST00000540982 400 ntBASIC4.46□□□□□ -1.7
RNF40O75150 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF40O75150 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.46□□□□□ -1.7
RNF40O75150 MIR4429-201ENST00000580105 73 ntBASIC4.46□□□□□ -1.7
RNF40O75150 AC006130.2-201ENST00000586202 326 ntBASIC4.46□□□□□ -1.7
RNF40O75150 AC008739.2-201ENST00000597006 317 ntBASIC4.46□□□□□ -1.7
RNF40O75150 FAM71BP1-201ENST00000604431 523 ntBASIC4.46□□□□□ -1.7
RNF40O75150 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
RNF40O75150 AL136964.1-201ENST00000622038 2990 ntBASIC4.45□□□□□ -1.7
RNF40O75150 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RNF40O75150 SNORD61-201ENST00000384252 73 ntBASIC4.45□□□□□ -1.7
RNF40O75150 RNU6-972P-201ENST00000391208 107 ntBASIC4.45□□□□□ -1.7
RNF40O75150 RNU6-57P-201ENST00000411348 103 ntBASIC4.45□□□□□ -1.7
RNF40O75150 AC016909.1-201ENST00000415916 166 ntBASIC4.45□□□□□ -1.7
RNF40O75150 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF40O75150 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
RNF40O75150 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
RNF40O75150 NDUFA4P2-201ENST00000489989 244 ntBASIC4.45□□□□□ -1.7
RNF40O75150 RN7SL691P-201ENST00000494487 301 ntBASIC4.45□□□□□ -1.7
RNF40O75150 RNY4P20-201ENST00000516678 93 ntBASIC4.45□□□□□ -1.7
RNF40O75150 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF40O75150 AC022655.2-201ENST00000577280 318 ntBASIC4.45□□□□□ -1.7
RNF40O75150 MIR486-1-201ENST00000612171 68 ntBASIC4.45□□□□□ -1.7
RNF40O75150 MIR3202-2-201ENST00000635980 79 ntBASIC4.45□□□□□ -1.7
RNF40O75150 MIR376A2-201ENST00000636782 80 ntBASIC4.45□□□□□ -1.7
RNF40O75150 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF40O75150 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF40O75150 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF40O75150 LINC02471-203ENST00000641941 4752 ntBASIC4.45□□□□□ -1.7
RNF40O75150 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF40O75150 AP001486.2-201ENST00000561652 5113 ntBASIC4.45□□□□□ -1.7
RNF40O75150 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF40O75150 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF40O75150 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNF40O75150 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF40O75150 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF40O75150 RNU1-22P-201ENST00000363334 158 ntBASIC4.44□□□□□ -1.7
RNF40O75150 SNORD24-201ENST00000383884 75 ntBASIC4.44□□□□□ -1.7
RNF40O75150 MIR3074-201ENST00000384885 81 ntBASIC4.44□□□□□ -1.7
RNF40O75150 RNU2-49P-201ENST00000410666 184 ntBASIC4.44□□□□□ -1.7
RNF40O75150 AL441985.1-201ENST00000457727 251 ntBASIC4.44□□□□□ -1.7
RNF40O75150 RNU6-240P-201ENST00000516098 97 ntBASIC4.44□□□□□ -1.7
RNF40O75150 RNA5SP49-201ENST00000516450 115 ntBASIC4.44□□□□□ -1.7
RNF40O75150 RNA5SP143-201ENST00000516936 115 ntBASIC4.44□□□□□ -1.7
RNF40O75150 AC023632.4-201ENST00000517783 191 ntBASIC4.44□□□□□ -1.7
RNF40O75150 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.44□□□□□ -1.7
RNF40O75150 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF40O75150 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF40O75150 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF40O75150 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF40O75150 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF40O75150 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF40O75150 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RNF40O75150 AC009487.4-201ENST00000624969 3585 ntBASIC4.43□□□□□ -1.7
RNF40O75150 AC010889.1-201ENST00000566193 2666 ntBASIC4.43□□□□□ -1.7
RNF40O75150 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF40O75150 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF40O75150 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF40O75150 Y_RNA.17-201ENST00000362433 111 ntBASIC4.43□□□□□ -1.7
RNF40O75150 Y_RNA.107-201ENST00000363190 121 ntBASIC4.43□□□□□ -1.7
RNF40O75150 Y_RNA.213-201ENST00000364178 111 ntBASIC4.43□□□□□ -1.7
RNF40O75150 Y_RNA.221-201ENST00000364248 96 ntBASIC4.43□□□□□ -1.7
RNF40O75150 Y_RNA.344-201ENST00000365381 112 ntBASIC4.43□□□□□ -1.7
RNF40O75150 SNORD77.3-201ENST00000391113 65 ntBASIC4.43□□□□□ -1.7
RNF40O75150 AL356095.1-201ENST00000417217 199 ntBASIC4.43□□□□□ -1.7
RNF40O75150 MRPS17P9-201ENST00000511924 393 ntBASIC4.43□□□□□ -1.7
RNF40O75150 RNU6-521P-201ENST00000516663 105 ntBASIC4.43□□□□□ -1.7
RNF40O75150 AC084364.2-201ENST00000546924 395 ntBASIC4.43□□□□□ -1.7
RNF40O75150 MIR3690-201ENST00000580266 75 ntBASIC4.43□□□□□ -1.7
RNF40O75150 RN7SL600P-201ENST00000581811 299 ntBASIC4.43□□□□□ -1.7
RNF40O75150 MIR3609-201ENST00000582661 80 ntBASIC4.43□□□□□ -1.7
RNF40O75150 MIR4753-201ENST00000585119 83 ntBASIC4.43□□□□□ -1.7
RNF40O75150 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF40O75150 MIR6867-201ENST00000610636 67 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms