Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC048334.1-201ENST00000477975 159 ntBASIC0.71□□□□□ -2.3
GMDSO60547 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.71□□□□□ -2.3
GMDSO60547 RNA5SP168-201ENST00000516642 112 ntBASIC0.71□□□□□ -2.3
GMDSO60547 RN7SKP49-201ENST00000516675 260 ntBASIC0.71□□□□□ -2.3
GMDSO60547 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.71□□□□□ -2.3
GMDSO60547 AC025647.1-201ENST00000517879 253 ntBASIC0.71□□□□□ -2.3
GMDSO60547 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
GMDSO60547 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.71□□□□□ -2.3
GMDSO60547 MTND4P7-201ENST00000523876 130 ntBASIC0.71□□□□□ -2.3
GMDSO60547 HIF1AP1-201ENST00000553642 175 ntBASIC0.71□□□□□ -2.3
GMDSO60547 AC009094.1-201ENST00000564443 426 ntBASIC0.71□□□□□ -2.3
GMDSO60547 MIR4698-201ENST00000577795 80 ntBASIC0.71□□□□□ -2.3
GMDSO60547 MIR5583-1-201ENST00000580941 59 ntBASIC0.71□□□□□ -2.3
GMDSO60547 AL390123.1-201ENST00000603216 237 ntBASIC0.71□□□□□ -2.3
GMDSO60547 AL357312.1-201ENST00000603879 298 ntBASIC0.71□□□□□ -2.3
GMDSO60547 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
GMDSO60547 RNU6-505P-201ENST00000384427 107 ntBASIC0.7□□□□□ -2.3
GMDSO60547 SNORA80D-201ENST00000384488 135 ntBASIC0.7□□□□□ -2.3
GMDSO60547 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
GMDSO60547 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
GMDSO60547 MTND3P9-201ENST00000429526 346 ntBASIC0.7□□□□□ -2.3
GMDSO60547 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.7□□□□□ -2.3
GMDSO60547 RNU7-125P-201ENST00000458760 62 ntBASIC0.7□□□□□ -2.3
GMDSO60547 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.7□□□□□ -2.3
GMDSO60547 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
GMDSO60547 SNORD79.1-201ENST00000516069 84 ntBASIC0.7□□□□□ -2.3
GMDSO60547 RNU6-922P-201ENST00000516753 99 ntBASIC0.7□□□□□ -2.3
GMDSO60547 AC087854.1-201ENST00000519706 414 ntBASIC0.7□□□□□ -2.3
GMDSO60547 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.7□□□□□ -2.3
GMDSO60547 AC008015.1-201ENST00000555505 465 ntBASIC0.7□□□□□ -2.3
GMDSO60547 AL137100.2-201ENST00000555786 315 ntBASIC0.7□□□□□ -2.3
GMDSO60547 SUB1P2-201ENST00000556401 297 ntBASIC0.7□□□□□ -2.3
GMDSO60547 AC022217.4-201ENST00000604389 163 ntBASIC0.7□□□□□ -2.3
GMDSO60547 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
GMDSO60547 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
GMDSO60547 MIR660-201ENST00000385235 97 ntBASIC0.69□□□□□ -2.3
GMDSO60547 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
GMDSO60547 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
GMDSO60547 AC016909.1-201ENST00000415916 166 ntBASIC0.69□□□□□ -2.3
GMDSO60547 MTATP6P18-201ENST00000417994 673 ntBASIC0.69□□□□□ -2.3
GMDSO60547 AC114482.1-201ENST00000418010 247 ntBASIC0.69□□□□□ -2.3
GMDSO60547 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.69□□□□□ -2.3
GMDSO60547 CETN4P-201ENST00000432407 469 ntBASIC0.69□□□□□ -2.3
GMDSO60547 RPL39P39-201ENST00000455840 151 ntBASIC0.69□□□□□ -2.3
GMDSO60547 SNORA14.1-201ENST00000516113 141 ntBASIC0.69□□□□□ -2.3
GMDSO60547 RN7SKP265-201ENST00000516448 223 ntBASIC0.69□□□□□ -2.3
GMDSO60547 MRPS36P4-201ENST00000534436 298 ntBASIC0.69□□□□□ -2.3
GMDSO60547 AL121579.1-201ENST00000555129 305 ntBASIC0.69□□□□□ -2.3
GMDSO60547 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
GMDSO60547 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.69□□□□□ -2.3
GMDSO60547 SNORA28-201ENST00000606769 126 ntBASIC0.69□□□□□ -2.3
GMDSO60547 uc_338.34-201ENST00000617467 174 ntBASIC0.69□□□□□ -2.3
GMDSO60547 AC106754.2-201ENST00000623006 233 ntBASIC0.69□□□□□ -2.3
GMDSO60547 AC005609.4-201ENST00000625071 447 ntBASIC0.69□□□□□ -2.3
GMDSO60547 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
GMDSO60547 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
GMDSO60547 RNU6-297P-201ENST00000384636 107 ntBASIC0.68□□□□□ -2.3
GMDSO60547 RNY3P10-201ENST00000384764 102 ntBASIC0.68□□□□□ -2.3
GMDSO60547 AL451046.2-201ENST00000403074 277 ntBASIC0.68□□□□□ -2.3
GMDSO60547 RNU6-248P-201ENST00000410720 107 ntBASIC0.68□□□□□ -2.3
GMDSO60547 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.68□□□□□ -2.3
GMDSO60547 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.68□□□□□ -2.3
GMDSO60547 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
GMDSO60547 RNA5SP54-201ENST00000516951 92 ntBASIC0.68□□□□□ -2.3
GMDSO60547 AL590705.4-201ENST00000532209 134 ntBASIC0.68□□□□□ -2.3
GMDSO60547 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.68□□□□□ -2.3
GMDSO60547 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.68□□□□□ -2.3
GMDSO60547 MIR3913-1-201ENST00000577744 102 ntBASIC0.68□□□□□ -2.3
GMDSO60547 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
GMDSO60547 U6.108-201ENST00000637764 58 ntBASIC0.68□□□□□ -2.3
GMDSO60547 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
GMDSO60547 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
GMDSO60547 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
GMDSO60547 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
GMDSO60547 RNU6-1266P-201ENST00000362794 105 ntBASIC0.67□□□□□ -2.3
GMDSO60547 RNU6-199P-201ENST00000362954 107 ntBASIC0.67□□□□□ -2.3
GMDSO60547 Y_RNA.123-201ENST00000363338 102 ntBASIC0.67□□□□□ -2.3
GMDSO60547 Y_RNA.124-201ENST00000363339 93 ntBASIC0.67□□□□□ -2.3
GMDSO60547 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
GMDSO60547 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.67□□□□□ -2.3
GMDSO60547 MIR653-201ENST00000385279 96 ntBASIC0.67□□□□□ -2.3
GMDSO60547 MIR1276-201ENST00000408707 83 ntBASIC0.67□□□□□ -2.3
GMDSO60547 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.67□□□□□ -2.3
GMDSO60547 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.67□□□□□ -2.3
GMDSO60547 AC005002.2-201ENST00000438228 269 ntBASIC0.67□□□□□ -2.3
GMDSO60547 RNU7-63P-201ENST00000459054 62 ntBASIC0.67□□□□□ -2.3
GMDSO60547 RNU7-180P-201ENST00000459240 63 ntBASIC0.67□□□□□ -2.3
GMDSO60547 MTCO3P38-201ENST00000468910 766 ntBASIC0.67□□□□□ -2.3
GMDSO60547 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.67□□□□□ -2.3
GMDSO60547 HMGB1P29-201ENST00000505659 499 ntBASIC0.67□□□□□ -2.3
GMDSO60547 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.67□□□□□ -2.3
GMDSO60547 AC090049.2-201ENST00000550377 109 ntBASIC0.67□□□□□ -2.3
GMDSO60547 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.67□□□□□ -2.3
GMDSO60547 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.67□□□□□ -2.3
GMDSO60547 AC022432.1-201ENST00000595739 310 ntBASIC0.67□□□□□ -2.3
GMDSO60547 SNORD11B-201ENST00000607707 90 ntBASIC0.67□□□□□ -2.3
GMDSO60547 AC109347.2-201ENST00000610220 349 ntBASIC0.67□□□□□ -2.3
GMDSO60547 SCARNA4-201ENST00000629045 128 ntBASIC0.67□□□□□ -2.3
GMDSO60547 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
GMDSO60547 MIR96-201ENST00000362288 78 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms