Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ZNF204P-201ENST00000416749 2397 ntBASIC1.6□□□□□ -2.15
LCMT2O60294 Y_RNA.390-201ENST00000383932 102 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 RNU6-767P-201ENST00000384132 107 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 RNU6-1026P-201ENST00000384465 108 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
LCMT2O60294 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 AC243428.1-201ENST00000421099 264 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 AL139396.1-201ENST00000421137 167 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 AL445305.1-201ENST00000432577 575 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 RPS3AP52-201ENST00000435639 297 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 RBMX2P4-201ENST00000441256 376 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.59□□□□□ -2.15
LCMT2O60294 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 SNORD5.1-201ENST00000458800 75 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.59□□□□□ -2.15
LCMT2O60294 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.59□□□□□ -2.15
LCMT2O60294 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.59□□□□□ -2.15
LCMT2O60294 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.59□□□□□ -2.15
LCMT2O60294 MIR4273-201ENST00000582824 84 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 AC010900.2-201ENST00000604508 210 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.59□□□□□ -2.15
LCMT2O60294 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.59□□□□□ -2.15
LCMT2O60294 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
LCMT2O60294 BX322639.1-202ENST00000423987 2213 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.58□□□□□ -2.16
LCMT2O60294 MIR126-201ENST00000362291 85 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 RNU6-845P-201ENST00000362578 103 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.58□□□□□ -2.16
LCMT2O60294 RNU6-418P-201ENST00000384035 107 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 FGF7P8-201ENST00000402994 292 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 PDCL2P1-201ENST00000419302 352 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 NCOR1P3-201ENST00000420479 303 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.58□□□□□ -2.16
LCMT2O60294 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.58□□□□□ -2.16
LCMT2O60294 RNU1-131P-201ENST00000458943 161 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 snoU13.30-201ENST00000458951 104 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
LCMT2O60294 AC046134.1-201ENST00000514454 666 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 RNU6-58P-201ENST00000517143 103 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 CBX3P8-201ENST00000532412 525 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 RRN3P3-201ENST00000549207 578 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 AC026470.2-201ENST00000561492 181 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 AC018462.2-201ENST00000605375 395 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.58□□□□□ -2.16
LCMT2O60294 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.58□□□□□ -2.16
LCMT2O60294 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
LCMT2O60294 RNU6-595P-201ENST00000363944 107 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 SNORD115-32-201ENST00000364079 82 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 RNU6-1283P-201ENST00000365314 105 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 MIR1283-1-201ENST00000408494 87 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 AC074085.1-201ENST00000413598 418 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 MTCO3P29-201ENST00000432119 779 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 AC009237.7-201ENST00000447357 229 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 Y_RNA.670-201ENST00000516255 105 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 RNU6-1016P-201ENST00000516689 94 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.57□□□□□ -2.16
LCMT2O60294 AC027288.2-201ENST00000553028 243 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.57□□□□□ -2.16
LCMT2O60294 MIR3198-2-201ENST00000577868 80 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 RMST_6.1-201ENST00000611980 203 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 AC137590.2-201ENST00000619709 240 ntBASIC1.57□□□□□ -2.16
LCMT2O60294 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
LCMT2O60294 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCMT2O60294 MIR424-201ENST00000362227 98 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 Y_RNA.88-201ENST00000363029 99 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 SNORD115-8-201ENST00000363856 82 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 SNORD115-38-201ENST00000365037 82 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 RNA5SP190-201ENST00000365222 118 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 Y_RNA.405-201ENST00000383979 100 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 Y_RNA.451-201ENST00000384200 100 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 RNU6-17P-201ENST00000384245 107 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 SNORA67.2-201ENST00000384300 149 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 RNU6-18P-201ENST00000384527 107 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 Y_RNA.524-201ENST00000384564 100 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 Y_RNA.561-201ENST00000384694 100 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 RNU6-482P-201ENST00000391068 107 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 Y_RNA.594-201ENST00000410373 140 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 RNU6-1050P-201ENST00000410388 107 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 RNU4-14P-201ENST00000410858 122 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 RPL21P111-201ENST00000418453 477 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 HMGB1P18-201ENST00000438801 619 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.56□□□□□ -2.16
LCMT2O60294 AC016717.1-201ENST00000448918 286 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 MTND4P17-201ENST00000470444 350 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 AC103851.1-201ENST00000506833 274 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.56□□□□□ -2.16
LCMT2O60294 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms