Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.29□□□□□ -2.36
ZFC3H1O60293 AC091021.1-201ENST00000468051 388 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
ZFC3H1O60293 MTND3P5-201ENST00000512798 333 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 AC112206.4-201ENST00000515142 405 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 SNORA14.1-201ENST00000516113 141 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 RNU4-54P-201ENST00000516428 129 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 RNU6-1098P-201ENST00000516772 96 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 RNA5SP54-201ENST00000516951 92 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 MTND4LP18-201ENST00000526864 291 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 AP003327.1-201ENST00000529684 127 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 MRPS36P4-201ENST00000534436 298 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 SUB1P2-201ENST00000556401 297 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
ZFC3H1O60293 EIF1P4-201ENST00000572664 335 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 PCGEM1.1-201ENST00000613431 131 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 AL133173.2-201ENST00000614270 90 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 AC137590.2-201ENST00000619709 240 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 MIR6755-201ENST00000619993 66 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 MTND4P5-201ENST00000435821 1374 ntBASIC0.29□□□□□ -2.36
ZFC3H1O60293 RNU4-67P-201ENST00000364569 141 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU6-534P-201ENST00000364877 106 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC004866.1-201ENST00000411748 78 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 ZNF885P-201ENST00000420174 1098 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.28□□□□□ -2.36
ZFC3H1O60293 MTND3P9-201ENST00000429526 346 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AL133396.1-201ENST00000432048 687 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC084290.1-201ENST00000434995 374 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 STAG3L5P-204ENST00000443759 179 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RPL39P5-202ENST00000512505 151 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 SNORA19.2-201ENST00000516013 114 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 SNORA18.6-201ENST00000516792 115 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 MTND1P35-201ENST00000526739 508 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 ZNF519P3-201ENST00000557158 1032 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 MIR4667-201ENST00000578933 66 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC073539.2-201ENST00000597113 165 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC073648.5-201ENST00000603502 305 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AL596327.1-201ENST00000603629 213 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC245014.2-201ENST00000603689 287 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 Z84480.1-201ENST00000605131 311 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC246785.4-201ENST00000605374 287 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 HULC.1-201ENST00000612720 240 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC131159.1-201ENST00000621854 213 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC097372.5-201ENST00000623665 376 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 snoZ196.1-201ENST00000625269 89 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU6-545P-201ENST00000362681 104 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNA5SP361-201ENST00000362686 118 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU6-1097P-201ENST00000363586 107 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNA5SP259-201ENST00000365541 109 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 SNORA67.2-201ENST00000384300 149 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU6-784P-201ENST00000384330 106 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU6-769P-201ENST00000384407 104 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU6-950P-201ENST00000384651 107 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.28□□□□□ -2.36
ZFC3H1O60293 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.28□□□□□ -2.36
ZFC3H1O60293 MTATP6P16-201ENST00000434543 526 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 MTCYBP39-201ENST00000437562 491 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU7-90P-201ENST00000459216 62 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNU6-1278P-201ENST00000516130 107 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RNA5SP285-201ENST00000516619 119 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC022616.3-201ENST00000523940 148 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 UBL5P4-201ENST00000562584 236 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC009094.1-201ENST00000564443 426 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AL929325.1-201ENST00000603096 117 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AC100812.1-201ENST00000607622 580 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 RMST_3.1-201ENST00000611651 109 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 AL157786.1-207ENST00000627771 695 ntBASIC0.28□□□□□ -2.36
ZFC3H1O60293 Y_RNA.151-201ENST00000363566 112 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 Y_RNA.287-201ENST00000364853 94 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
ZFC3H1O60293 MTCYBP36-201ENST00000404146 440 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 RNU2-66P-201ENST00000410650 161 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 RPS3AP3-201ENST00000411933 242 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 CDK8P2-201ENST00000415020 547 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 MTCO2P34-201ENST00000421994 607 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.27□□□□□ -2.37
ZFC3H1O60293 USP9YP14-201ENST00000430663 563 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 AC119618.1-201ENST00000434191 222 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 RPS25P9-201ENST00000435591 252 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 MTCO3P18-201ENST00000440206 761 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.27□□□□□ -2.37
ZFC3H1O60293 AC073910.1-201ENST00000445047 438 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 AL392103.1-201ENST00000447000 198 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 RNU6-1037P-201ENST00000459571 107 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 Y_RNA.654-201ENST00000497848 106 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 Y_RNA.672-201ENST00000516289 104 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.27□□□□□ -2.37
ZFC3H1O60293 AC022616.6-201ENST00000520479 119 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 MTND4P7-201ENST00000523876 130 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
ZFC3H1O60293 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.27□□□□□ -2.37
ZFC3H1O60293 MIR5695-201ENST00000579717 85 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms