Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC009487.4-201ENST00000624969 3585 ntBASIC2.01□□□□□ -2.09
SSX4O60224 LINC02555-201ENST00000563933 1951 ntBASIC2.01□□□□□ -2.09
SSX4O60224 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
SSX4O60224 MIR340-201ENST00000362125 95 ntBASIC2□□□□□ -2.09
SSX4O60224 RNU6-280P-201ENST00000364145 104 ntBASIC2□□□□□ -2.09
SSX4O60224 RNU6-160P-201ENST00000384591 107 ntBASIC2□□□□□ -2.09
SSX4O60224 MIR300-201ENST00000401138 83 ntBASIC2□□□□□ -2.09
SSX4O60224 Y_RNA.604-201ENST00000410574 102 ntBASIC2□□□□□ -2.09
SSX4O60224 AC139712.2-201ENST00000424302 339 ntBASIC2□□□□□ -2.09
SSX4O60224 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2□□□□□ -2.09
SSX4O60224 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2□□□□□ -2.09
SSX4O60224 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2□□□□□ -2.09
SSX4O60224 AC055731.1-201ENST00000474387 401 ntBASIC2□□□□□ -2.09
SSX4O60224 RNU6-1114P-201ENST00000516022 107 ntBASIC2□□□□□ -2.09
SSX4O60224 Y_RNA.675-201ENST00000516389 149 ntBASIC2□□□□□ -2.09
SSX4O60224 RNU6-344P-201ENST00000516635 111 ntBASIC2□□□□□ -2.09
SSX4O60224 RNU2-19P-201ENST00000517288 84 ntBASIC2□□□□□ -2.09
SSX4O60224 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2□□□□□ -2.09
SSX4O60224 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2□□□□□ -2.09
SSX4O60224 MIR1273D-201ENST00000577266 86 ntBASIC2□□□□□ -2.09
SSX4O60224 MIR5695-201ENST00000579717 85 ntBASIC2□□□□□ -2.09
SSX4O60224 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SSX4O60224 RNU1-58P-201ENST00000362413 163 ntBASIC1.99□□□□□ -2.09
SSX4O60224 Y_RNA.132-201ENST00000363421 102 ntBASIC1.99□□□□□ -2.09
SSX4O60224 Y_RNA.364-201ENST00000365532 101 ntBASIC1.99□□□□□ -2.09
SSX4O60224 RNU1-139P-201ENST00000391307 165 ntBASIC1.99□□□□□ -2.09
SSX4O60224 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SSX4O60224 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.99□□□□□ -2.09
SSX4O60224 AL356379.1-201ENST00000414105 126 ntBASIC1.99□□□□□ -2.09
SSX4O60224 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.99□□□□□ -2.09
SSX4O60224 AC007395.1-201ENST00000451333 677 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AC010531.2-201ENST00000465012 153 ntBASIC1.99□□□□□ -2.09
SSX4O60224 RNU1-117P-201ENST00000517041 158 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.99□□□□□ -2.09
SSX4O60224 SUB1P3-201ENST00000564581 315 ntBASIC1.99□□□□□ -2.09
SSX4O60224 MIR4753-201ENST00000585119 83 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AC103810.6-201ENST00000606708 136 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AL590240.4-201ENST00000616908 390 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AC130454.1-201ENST00000622948 401 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AL359697.1-201ENST00000624879 587 ntBASIC1.99□□□□□ -2.09
SSX4O60224 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.99□□□□□ -2.09
SSX4O60224 AP006437.1-201ENST00000641440 3685 ntBASIC1.99□□□□□ -2.09
SSX4O60224 RNU1-62P-201ENST00000362599 164 ntBASIC1.98□□□□□ -2.09
SSX4O60224 RNU4-79P-201ENST00000362764 141 ntBASIC1.98□□□□□ -2.09
SSX4O60224 RNA5SP493-201ENST00000364115 91 ntBASIC1.98□□□□□ -2.09
SSX4O60224 RNU6-1305P-201ENST00000364353 104 ntBASIC1.98□□□□□ -2.09
SSX4O60224 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
SSX4O60224 RNU6-418P-201ENST00000384035 107 ntBASIC1.98□□□□□ -2.09
SSX4O60224 SNORA67.2-201ENST00000384300 149 ntBASIC1.98□□□□□ -2.09
SSX4O60224 Y_RNA.577-201ENST00000384794 101 ntBASIC1.98□□□□□ -2.09
SSX4O60224 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
SSX4O60224 RNU11-3P-201ENST00000391111 133 ntBASIC1.98□□□□□ -2.09
SSX4O60224 AL033519.2-201ENST00000403958 392 ntBASIC1.98□□□□□ -2.09
SSX4O60224 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSX4O60224 HMGN2P3-201ENST00000433603 273 ntBASIC1.98□□□□□ -2.09
SSX4O60224 AC236972.2-201ENST00000434979 310 ntBASIC1.98□□□□□ -2.09
SSX4O60224 HMGN2P5-201ENST00000436882 273 ntBASIC1.98□□□□□ -2.09
SSX4O60224 MTCO1P44-201ENST00000441935 243 ntBASIC1.98□□□□□ -2.09
SSX4O60224 AC096638.1-201ENST00000444678 216 ntBASIC1.98□□□□□ -2.09
SSX4O60224 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.98□□□□□ -2.09
SSX4O60224 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
SSX4O60224 AP005660.1-201ENST00000522972 293 ntBASIC1.98□□□□□ -2.09
SSX4O60224 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.98□□□□□ -2.09
SSX4O60224 AC090617.3-201ENST00000573670 475 ntBASIC1.98□□□□□ -2.09
SSX4O60224 SNORD11B-201ENST00000607707 90 ntBASIC1.98□□□□□ -2.09
SSX4O60224 AC005296.1-201ENST00000616145 209 ntBASIC1.98□□□□□ -2.09
SSX4O60224 AC126177.8-201ENST00000618339 1015 ntBASIC1.98□□□□□ -2.09
SSX4O60224 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SSX4O60224 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSX4O60224 RNU6-23P-201ENST00000363283 107 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNU6-727P-201ENST00000363592 107 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNU5F-3P-201ENST00000363767 117 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
SSX4O60224 Y_RNA.358-201ENST00000365491 99 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNU6-281P-201ENST00000384212 103 ntBASIC1.97□□□□□ -2.09
SSX4O60224 Y_RNA.557-201ENST00000384680 107 ntBASIC1.97□□□□□ -2.09
SSX4O60224 MIR597-201ENST00000384968 97 ntBASIC1.97□□□□□ -2.09
SSX4O60224 MIR586-201ENST00000385035 97 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNA5SP213-201ENST00000391031 106 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNU6-1156P-201ENST00000410365 100 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNA5SP504-201ENST00000410676 117 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNA5SP450-201ENST00000411206 102 ntBASIC1.97□□□□□ -2.09
SSX4O60224 EIF1P2-201ENST00000428233 350 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RPS15AP28-201ENST00000435088 386 ntBASIC1.97□□□□□ -2.09
SSX4O60224 AL021397.1-201ENST00000451806 248 ntBASIC1.97□□□□□ -2.09
SSX4O60224 RNU7-152P-201ENST00000458982 64 ntBASIC1.97□□□□□ -2.09
SSX4O60224 U8.22-201ENST00000459141 133 ntBASIC1.97□□□□□ -2.09
SSX4O60224 MIR2053-201ENST00000459295 91 ntBASIC1.97□□□□□ -2.09
SSX4O60224 AC091179.3-201ENST00000474761 144 ntBASIC1.97□□□□□ -2.09
SSX4O60224 HMGN2P9-201ENST00000476875 229 ntBASIC1.97□□□□□ -2.09
SSX4O60224 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.97□□□□□ -2.09
SSX4O60224 RNU6-237P-201ENST00000515985 71 ntBASIC1.97□□□□□ -2.09
SSX4O60224 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.97□□□□□ -2.09
SSX4O60224 MIR4769-201ENST00000584126 77 ntBASIC1.97□□□□□ -2.09
SSX4O60224 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
SSX4O60224 AC007229.1-201ENST00000590455 412 ntBASIC1.97□□□□□ -2.09
SSX4O60224 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
SSX4O60224 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSX4O60224 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms