Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 RNU6-323P-201ENST00000521915 107 ntBASIC0.07□□□□□ -2.4
PDE6DO43924 SNRPGP20-201ENST00000604477 205 ntBASIC0.07□□□□□ -2.4
PDE6DO43924 AC243829.3-201ENST00000622177 108 ntBASIC0.07□□□□□ -2.4
PDE6DO43924 AL049777.1-201ENST00000622740 518 ntBASIC0.07□□□□□ -2.4
PDE6DO43924 MIR103A2-201ENST00000362154 78 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 RNU5B-2P-201ENST00000363036 113 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 RNA5SP99-201ENST00000364020 114 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.06□□□□□ -2.4
PDE6DO43924 RNU6-83P-201ENST00000384568 112 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 RNU4-46P-201ENST00000410818 138 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.06□□□□□ -2.4
PDE6DO43924 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.06□□□□□ -2.4
PDE6DO43924 AC007215.1-201ENST00000464893 276 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 RNA5SP102-201ENST00000516865 106 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 AC090572.1-201ENST00000519251 160 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 AP003716.2-201ENST00000528260 108 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 AP000889.1-201ENST00000530968 660 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 FAM106DP-201ENST00000586416 501 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.06□□□□□ -2.4
PDE6DO43924 AL390237.1-201ENST00000404226 1415 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 RNU6-501P-201ENST00000364072 100 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 SNORD105-201ENST00000386910 85 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 RNA5SP494-201ENST00000410653 129 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 EPS15P1-201ENST00000448836 336 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 RNU7-12P-201ENST00000516030 62 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 RNU6-496P-201ENST00000516145 99 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.05□□□□□ -2.4
PDE6DO43924 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.05□□□□□ -2.4
PDE6DO43924 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
PDE6DO43924 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.05□□□□□ -2.4
PDE6DO43924 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.05□□□□□ -2.4
PDE6DO43924 PCMTD1P2-201ENST00000565017 355 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 MIR4431-201ENST00000579990 94 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.05□□□□□ -2.4
PDE6DO43924 MTATP6P3-201ENST00000581686 676 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 AL117336.2-201ENST00000602435 335 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 RNU6-94P-201ENST00000607728 107 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.05□□□□□ -2.4
PDE6DO43924 AC004808.1-201ENST00000627671 721 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 AC099654.13-201ENST00000639774 207 ntBASIC0.05□□□□□ -2.4
PDE6DO43924 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.05□□□□□ -2.4
PDE6DO43924 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
PDE6DO43924 Y_RNA.265-201ENST00000364677 108 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 SNORD70.1-201ENST00000391007 85 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 AL365184.2-201ENST00000431139 435 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.04□□□□□ -2.4
PDE6DO43924 USP9YP29-201ENST00000445112 563 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.04□□□□□ -2.4
PDE6DO43924 RNA5SP454-201ENST00000517231 127 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 AC069113.1-201ENST00000517763 267 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 MIR4775-201ENST00000581168 75 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 AC018714.1-201ENST00000605028 208 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 AC100812.1-201ENST00000607622 580 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 AC122133.1-201ENST00000613964 233 ntBASIC0.04□□□□□ -2.4
PDE6DO43924 RNU6-1200P-201ENST00000384162 107 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 AL355143.1-201ENST00000407101 841 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.03□□□□□ -2.4
PDE6DO43924 MTCO2P3-201ENST00000442543 421 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.03□□□□□ -2.4
PDE6DO43924 AP000870.1-201ENST00000472927 406 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 RN7SL429P-201ENST00000479090 223 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 RN7SL489P-201ENST00000486185 223 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 RN7SL327P-201ENST00000488659 223 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 AC105313.1-201ENST00000509121 353 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 RNU6-344P-201ENST00000516635 111 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 RNU6-410P-201ENST00000517006 107 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.03□□□□□ -2.4
PDE6DO43924 MTCO3P23-201ENST00000561363 289 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 AGGF1P4-201ENST00000568249 801 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 7SK.7-201ENST00000603504 247 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 AP000811.1-201ENST00000603803 651 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 RN7SL853P-201ENST00000617250 223 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 AC139792.3-201ENST00000623525 224 ntBASIC0.03□□□□□ -2.4
PDE6DO43924 MIR103A1-201ENST00000362165 78 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 RNU6-1127P-201ENST00000384580 107 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 MIR454-201ENST00000390180 115 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 RNU6-994P-201ENST00000410507 111 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.02□□□□□ -2.41
PDE6DO43924 RPL31P35-201ENST00000431058 377 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 AC084290.1-201ENST00000434995 374 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 AC104850.1-201ENST00000435940 476 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 RNU7-182P-201ENST00000459009 62 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.02□□□□□ -2.41
PDE6DO43924 AC091304.9-201ENST00000612091 226 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.02□□□□□ -2.41
PDE6DO43924 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
PDE6DO43924 RNU6-1029P-201ENST00000384109 107 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 MIR526A1-201ENST00000384897 85 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 MIR320B2-201ENST00000408479 138 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 MIR1827-201ENST00000408549 66 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 MIR1185-1-201ENST00000408598 86 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 MTCO2P34-201ENST00000421994 607 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.01□□□□□ -2.41
PDE6DO43924 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.01□□□□□ -2.41
PDE6DO43924 RNU7-28P-201ENST00000516759 62 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 RNU6-612P-201ENST00000516909 102 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 RNU1-117P-201ENST00000517041 158 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms