Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SNRPGP20-201ENST00000604477 205 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 SNORA28-201ENST00000606769 126 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 AC093913.1-201ENST00000614178 329 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 SCARNA4-201ENST00000629045 128 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 RNU6-108P-201ENST00000365558 107 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.27□□□□□ -2.37
SSNA1O43805 RNU6-1286P-201ENST00000383871 107 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 AC244098.3-201ENST00000424803 96 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 MTND3P9-201ENST00000429526 346 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.27□□□□□ -2.37
SSNA1O43805 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
SSNA1O43805 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.27□□□□□ -2.37
SSNA1O43805 RNU7-94P-201ENST00000459576 63 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.27□□□□□ -2.37
SSNA1O43805 FABP5P5-201ENST00000515537 406 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 RNU6-229P-201ENST00000516614 102 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 AC022868.1-201ENST00000517767 391 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 MRPS36P4-201ENST00000534436 298 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.27□□□□□ -2.37
SSNA1O43805 Z84480.1-201ENST00000605131 311 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 RMST_3.1-201ENST00000611651 109 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 uc_338.11-201ENST00000619132 160 ntBASIC0.27□□□□□ -2.37
SSNA1O43805 RNA5SP499-201ENST00000363982 119 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 RNA5SP126-201ENST00000365092 109 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 Y_RNA.399-201ENST00000383955 105 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 RNU1-119P-201ENST00000391122 165 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.26□□□□□ -2.37
SSNA1O43805 ISCA1P6-201ENST00000427740 390 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 RPL23AP50-201ENST00000434149 455 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 AL162725.1-201ENST00000435405 301 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 USP9YP29-201ENST00000445112 563 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 RNU7-167P-201ENST00000459160 62 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 AC105417.1-201ENST00000514691 285 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 AC109810.1-201ENST00000534066 224 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 FRG2DP-202ENST00000566967 323 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 AC011195.1-201ENST00000578177 177 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 MTND1P15-201ENST00000579262 949 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 MIR3192-201ENST00000584920 77 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.26□□□□□ -2.37
SSNA1O43805 MTND5P16-201ENST00000460269 1703 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 RNU6-1097P-201ENST00000363586 107 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 SNORA11-201ENST00000408789 128 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 RNA5SP222-201ENST00000411039 105 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.25□□□□□ -2.37
SSNA1O43805 RPL31P35-201ENST00000431058 377 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 RN7SKP12-201ENST00000516275 143 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 RNU6-344P-201ENST00000516635 111 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 AC106038.2-201ENST00000520706 568 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.25□□□□□ -2.37
SSNA1O43805 AC006566.1-201ENST00000608943 513 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 TUSC7.1-201ENST00000610969 165 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 AC100810.6-201ENST00000638068 285 ntBASIC0.25□□□□□ -2.37
SSNA1O43805 AC068700.1-201ENST00000565862 3754 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 SNORA36.2-201ENST00000384004 127 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 MIR487A-201ENST00000385009 80 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 RNU6-1106P-201ENST00000390845 107 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.24□□□□□ -2.37
SSNA1O43805 AL591806.2-201ENST00000433122 173 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.24□□□□□ -2.37
SSNA1O43805 AF186996.7-201ENST00000492781 209 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 OR9P1P-201ENST00000496431 281 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 MTND4LP26-201ENST00000518144 282 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.24□□□□□ -2.37
SSNA1O43805 ELOCP32-201ENST00000548625 324 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.24□□□□□ -2.37
SSNA1O43805 MIR3941-201ENST00000582572 103 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.24□□□□□ -2.37
SSNA1O43805 MIR548AB-201ENST00000584917 84 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.24□□□□□ -2.37
SSNA1O43805 AL117336.2-201ENST00000602435 335 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 AF131215.7-201ENST00000602443 707 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 MIR98-201ENST00000606724 119 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 MIR6798-201ENST00000612887 67 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 ZNF204P-201ENST00000416749 2397 ntBASIC0.24□□□□□ -2.37
SSNA1O43805 MTND4P4-201ENST00000439033 1366 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 RNA5SP264-201ENST00000363115 107 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 Y_RNA.265-201ENST00000364677 108 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SSNA1O43805 SNORA50A-201ENST00000384225 134 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 RNU6-163P-201ENST00000384396 106 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 AL663109.1-201ENST00000411498 844 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 SSR1P2-201ENST00000415208 787 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.23□□□□□ -2.37
SSNA1O43805 AC004854.1-201ENST00000440356 349 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.23□□□□□ -2.37
SSNA1O43805 GMFBP1-201ENST00000467831 427 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 RNU7-12P-201ENST00000516030 62 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 RNU6-1110P-201ENST00000516462 101 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 MIR5583-1-201ENST00000580941 59 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 AC004223.2-201ENST00000590309 544 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 AL022161.1-201ENST00000604390 213 ntBASIC0.23□□□□□ -2.37
SSNA1O43805 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 Y_RNA.123-201ENST00000363338 102 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.22□□□□□ -2.37
SSNA1O43805 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.22□□□□□ -2.37
SSNA1O43805 AC009961.2-201ENST00000435771 251 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms