Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 DEFB117-201ENST00000602356 141 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AP001485.1-201ENST00000604799 199 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 snoU18.1-201ENST00000629629 71 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SRGAP3O43295 AC091152.2-201ENST00000591628 2569 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SRGAP3O43295 AC002543.1-201ENST00000299783 1954 ntBASIC3.43□□□□□ -1.86
SRGAP3O43295 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SRGAP3O43295 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.43□□□□□ -1.86
SRGAP3O43295 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SRGAP3O43295 Y_RNA.435-201ENST00000384095 112 ntBASIC3.43□□□□□ -1.86
SRGAP3O43295 MIR320B2-201ENST00000408479 138 ntBASIC3.43□□□□□ -1.86
SRGAP3O43295 RNU6-1135P-201ENST00000411083 103 ntBASIC3.43□□□□□ -1.86
SRGAP3O43295 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.43□□□□□ -1.86
SRGAP3O43295 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.43□□□□□ -1.86
SRGAP3O43295 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.43□□□□□ -1.86
SRGAP3O43295 snoU13.28-201ENST00000459235 104 ntBASIC3.43□□□□□ -1.86
SRGAP3O43295 CYP4A27P-201ENST00000567218 190 ntBASIC3.43□□□□□ -1.86
SRGAP3O43295 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.43□□□□□ -1.86
SRGAP3O43295 MIR26A1-201ENST00000362205 77 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 SNORD116-18-201ENST00000383961 92 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 RNU6-245P-201ENST00000384020 107 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SRGAP3O43295 ELOCP21-201ENST00000412558 336 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.42□□□□□ -1.86
SRGAP3O43295 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.42□□□□□ -1.86
SRGAP3O43295 AC007215.1-201ENST00000464893 276 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.42□□□□□ -1.86
SRGAP3O43295 AC105137.2-201ENST00000569073 466 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 MIR3609-201ENST00000582661 80 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.42□□□□□ -1.86
SRGAP3O43295 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.42□□□□□ -1.86
SRGAP3O43295 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.42□□□□□ -1.86
SRGAP3O43295 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.42□□□□□ -1.86
SRGAP3O43295 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SRGAP3O43295 RNU6-1310P-201ENST00000384153 107 ntBASIC3.41□□□□□ -1.86
SRGAP3O43295 AC103975.1-201ENST00000482506 483 ntBASIC3.41□□□□□ -1.86
SRGAP3O43295 AIG1P1-201ENST00000503376 148 ntBASIC3.41□□□□□ -1.86
SRGAP3O43295 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.41□□□□□ -1.86
SRGAP3O43295 RNU6-107P-201ENST00000516643 102 ntBASIC3.41□□□□□ -1.86
SRGAP3O43295 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.41□□□□□ -1.86
SRGAP3O43295 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.41□□□□□ -1.86
SRGAP3O43295 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.41□□□□□ -1.86
SRGAP3O43295 MIR3136-201ENST00000583498 78 ntBASIC3.41□□□□□ -1.86
SRGAP3O43295 AL008718.3-201ENST00000610217 321 ntBASIC3.41□□□□□ -1.86
SRGAP3O43295 MIR3674-201ENST00000636576 68 ntBASIC3.41□□□□□ -1.86
SRGAP3O43295 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRGAP3O43295 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.41□□□□□ -1.86
SRGAP3O43295 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.41□□□□□ -1.86
SRGAP3O43295 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
SRGAP3O43295 RNU6-1272P-201ENST00000362776 107 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 RNU6-653P-201ENST00000363074 106 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 MIR181B1-201ENST00000385240 110 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 RNA5SP475-201ENST00000410568 110 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 RNA5SP21-201ENST00000410917 96 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 RNU5E-9P-201ENST00000411164 104 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 PTGES3P4-201ENST00000426243 356 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.4□□□□□ -1.87
SRGAP3O43295 AP002001.1-203ENST00000534002 267 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 MIR5692C2-201ENST00000577959 77 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 MIR3605-201ENST00000583214 100 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 AL356575.1-201ENST00000603008 283 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 SNRPGP20-201ENST00000604477 205 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 AC108706.1-201ENST00000611053 297 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.4□□□□□ -1.87
SRGAP3O43295 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.4□□□□□ -1.87
SRGAP3O43295 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRGAP3O43295 RNU6-324P-201ENST00000363957 106 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 SNORD50.2-201ENST00000365465 70 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 RNU6-19P-201ENST00000384718 107 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 Y_RNA.571-201ENST00000384753 98 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 CBX3P9-201ENST00000402326 552 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 RNU2-54P-201ENST00000410299 190 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 RNU6-1199P-201ENST00000411249 104 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.39□□□□□ -1.87
SRGAP3O43295 AC140059.1-201ENST00000489238 361 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.39□□□□□ -1.87
SRGAP3O43295 RNA5SP356-201ENST00000515972 94 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 RNU5F-2P-201ENST00000516066 82 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.39□□□□□ -1.87
SRGAP3O43295 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.39□□□□□ -1.87
SRGAP3O43295 MIR3923-201ENST00000579521 83 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.39□□□□□ -1.87
SRGAP3O43295 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 AC006380.1-201ENST00000603598 186 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 HSPE1P7-201ENST00000604681 321 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 AL034555.1-201ENST00000604816 211 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.39□□□□□ -1.87
SRGAP3O43295 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRGAP3O43295 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SRGAP3O43295 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRGAP3O43295 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SRGAP3O43295 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRGAP3O43295 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SRGAP3O43295 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SRGAP3O43295 AC108206.1-201ENST00000570186 4159 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 RNU1-62P-201ENST00000362599 164 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms