Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MIR320B2-201ENST00000408479 138 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 RNU6-174P-201ENST00000410406 106 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 Y_RNA.599-201ENST00000410489 109 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 RPL30P16-201ENST00000419341 429 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 AC243428.1-201ENST00000421099 264 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.3□□□□□ -2.04
NPHP1O15259 RNU6-358P-201ENST00000516564 75 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 RNA5SP54-201ENST00000516951 92 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.3□□□□□ -2.04
NPHP1O15259 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.3□□□□□ -2.04
NPHP1O15259 MIR4790-201ENST00000577799 79 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.3□□□□□ -2.04
NPHP1O15259 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.3□□□□□ -2.04
NPHP1O15259 MIR3683-201ENST00000580847 82 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 AC010900.2-201ENST00000604508 210 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 MIR502-201ENST00000606349 86 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 AC084782.3-201ENST00000612282 578 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 AC083806.3-201ENST00000614016 455 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 Y_RNA.619-201ENST00000410951 90 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 ATP5J2P3-201ENST00000451550 258 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 snoU13.30-201ENST00000458951 104 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 HMGN2P9-201ENST00000476875 229 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 RPL30P10-201ENST00000488148 337 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.29□□□□□ -2.04
NPHP1O15259 RNU1-54P-201ENST00000517181 120 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.29□□□□□ -2.04
NPHP1O15259 MIR4742-201ENST00000581069 85 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 AC103810.8-201ENST00000607347 118 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 MIR6128-201ENST00000615528 109 ntBASIC2.29□□□□□ -2.04
NPHP1O15259 RNU6-1059P-201ENST00000363752 98 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 MIR153-2-201ENST00000385225 87 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 AL139396.1-201ENST00000421137 167 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 USP9YP30-201ENST00000430729 455 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 AC010409.1-201ENST00000487382 476 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 Y_RNA.682-201ENST00000516457 100 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 RNU2-34P-201ENST00000516534 121 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 RNU6-250P-201ENST00000516958 103 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 MTND4LP26-201ENST00000518144 282 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP1O15259 AL133216.2-202ENST00000634512 349 ntBASIC2.28□□□□□ -2.04
NPHP1O15259 RNU6-975P-201ENST00000384296 105 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 Y_RNA.533-201ENST00000384596 114 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 MIR586-201ENST00000385035 97 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 AL356776.1-201ENST00000406574 447 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.27□□□□□ -2.05
NPHP1O15259 AC099677.2-201ENST00000436385 175 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 SNORD5.1-201ENST00000458800 75 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 MTND5P5-201ENST00000503764 376 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 RNU6-344P-201ENST00000516635 111 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 AC027288.2-201ENST00000553028 243 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 MIR5094-201ENST00000578766 85 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 MIR4273-201ENST00000582824 84 ntBASIC2.27□□□□□ -2.05
NPHP1O15259 RNU6-661P-201ENST00000362409 107 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 Y_RNA.319-201ENST00000365138 92 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 RNU6-245P-201ENST00000384020 107 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 SNORA67.2-201ENST00000384300 149 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 AL033519.2-201ENST00000403958 392 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 RNU4-62P-201ENST00000410125 130 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 MTND3P8-201ENST00000412909 339 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 NCOR1P3-201ENST00000420479 303 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 PPP1R2P5-201ENST00000457256 603 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 RNU6-1198P-201ENST00000516904 67 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 RNU6-58P-201ENST00000517143 103 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 MIR3935-201ENST00000583472 104 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 AC092794.1-201ENST00000612734 582 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 U6atac.1-201ENST00000616025 117 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 uc_338.20-201ENST00000621563 178 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 AC008873.1-201ENST00000625051 138 ntBASIC2.26□□□□□ -2.05
NPHP1O15259 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPHP1O15259 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
NPHP1O15259 RNU6-17P-201ENST00000384245 107 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 RNU6-842P-201ENST00000384269 107 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 RNU6-18P-201ENST00000384527 107 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 RNU6-1235P-201ENST00000384559 107 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 RNU6-321P-201ENST00000410912 106 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 AC060773.1-201ENST00000421698 310 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP1O15259 AC016717.1-201ENST00000448918 286 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 RNU6-498P-201ENST00000459468 107 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 AC114982.1-201ENST00000469402 321 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 RPS29P11-201ENST00000496507 171 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 TRMT112P2-201ENST00000512910 132 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 RNU6-948P-201ENST00000516374 107 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 SNORA31.17-201ENST00000516953 127 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 AP003033.1-201ENST00000527244 415 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP1O15259 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP1O15259 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.25□□□□□ -2.05
NPHP1O15259 ZNF299P-201ENST00000406845 1804 ntBASIC2.24□□□□□ -2.05
NPHP1O15259 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NPHP1O15259 Y_RNA.72-201ENST00000362894 103 ntBASIC2.24□□□□□ -2.05
NPHP1O15259 RNU6-112P-201ENST00000363599 104 ntBASIC2.24□□□□□ -2.05
NPHP1O15259 RNU6-137P-201ENST00000363680 108 ntBASIC2.24□□□□□ -2.05
NPHP1O15259 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NPHP1O15259 MIR548K-201ENST00000408406 116 ntBASIC2.24□□□□□ -2.05
NPHP1O15259 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP1O15259 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.24□□□□□ -2.05
NPHP1O15259 AC018710.1-201ENST00000506509 158 ntBASIC2.24□□□□□ -2.05
NPHP1O15259 AC107393.1-201ENST00000512403 346 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms