Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR573-201ENST00000384964 99 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 RNU6-747P-201ENST00000390928 104 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 RNU6-241P-201ENST00000391148 104 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 RNU2-34P-201ENST00000516534 121 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.58□□□□□ -2.5
CHD1O14646 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.58□□□□□ -2.5
CHD1O14646 RNU6-817P-201ENST00000391083 104 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 MIR1253-201ENST00000408273 105 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 AC007283.2-201ENST00000424739 197 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 TPT1P7-201ENST00000458300 517 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 RNU6-64P-201ENST00000517119 105 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 AC023157.2-201ENST00000540596 141 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 RPL23AP91-201ENST00000569211 455 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 AC005176.2-201ENST00000596933 147 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 AC006157.1-201ENST00000611750 366 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 MIR4320-201ENST00000636981 65 ntBASIC-0.59□□□□□ -2.5
CHD1O14646 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.6□□□□□ -2.51
CHD1O14646 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.6□□□□□ -2.51
CHD1O14646 RNU6-917P-201ENST00000516294 104 ntBASIC-0.6□□□□□ -2.51
CHD1O14646 AC105185.1-201ENST00000518705 535 ntBASIC-0.6□□□□□ -2.51
CHD1O14646 AC026616.1-201ENST00000523157 525 ntBASIC-0.6□□□□□ -2.51
CHD1O14646 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.6□□□□□ -2.51
CHD1O14646 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.6□□□□□ -2.51
CHD1O14646 SNORD41-201ENST00000386967 70 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 SNORA75.6-201ENST00000391318 127 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.61□□□□□ -2.51
CHD1O14646 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.61□□□□□ -2.51
CHD1O14646 RNU2-46P-201ENST00000517038 113 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 ZNF321P-202ENST00000550843 495 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 AC012414.2-201ENST00000559474 187 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.61□□□□□ -2.51
CHD1O14646 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.61□□□□□ -2.51
CHD1O14646 MIR300-201ENST00000401138 83 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 RPS29P15-201ENST00000458329 171 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 AC104563.1-201ENST00000476147 376 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.61□□□□□ -2.51
CHD1O14646 AP000811.1-201ENST00000603803 651 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 AC100814.1-201ENST00000606963 623 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 AC124016.2-201ENST00000610058 665 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.61□□□□□ -2.51
CHD1O14646 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 SNORA1.1-201ENST00000364671 133 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 RNU6-378P-201ENST00000384324 107 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 SNORA51.10-201ENST00000384418 136 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 MIR1185-1-201ENST00000408598 86 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 AC078809.1-201ENST00000427601 140 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.62□□□□□ -2.51
CHD1O14646 RNU4-49P-201ENST00000516080 140 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 AC013828.2-201ENST00000532487 235 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.62□□□□□ -2.51
CHD1O14646 AC024940.5-201ENST00000622889 474 ntBASIC-0.62□□□□□ -2.51
CHD1O14646 RNU6-744P-201ENST00000365557 107 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 MIR587-201ENST00000384845 96 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.63□□□□□ -2.51
CHD1O14646 HSFY5P-201ENST00000453726 309 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 RNU6-914P-201ENST00000516749 109 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
CHD1O14646 AP003716.2-201ENST00000528260 108 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 AC092447.9-201ENST00000603395 144 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 AC022217.4-201ENST00000604389 163 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 AL096861.1-201ENST00000610899 123 ntBASIC-0.63□□□□□ -2.51
CHD1O14646 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHD1O14646 AC244670.1-201ENST00000436879 112 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHD1O14646 RNU7-12P-201ENST00000516030 62 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 SNORA25.18-201ENST00000607153 114 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 AP000484.1-201ENST00000620067 1252 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 FRG1KP-201ENST00000623592 341 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 RNU6-293P-201ENST00000411259 106 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHD1O14646 AC245047.3-201ENST00000429428 127 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 U8.21-201ENST00000459536 136 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHD1O14646 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.64□□□□□ -2.51
CHD1O14646 RNU6-848P-201ENST00000515948 107 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 RNU6-617P-201ENST00000516147 107 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 RNU6-473P-201ENST00000516164 107 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.64□□□□□ -2.51
CHD1O14646 AC010975.3-201ENST00000618727 978 ntBASIC-0.64□□□□□ -2.51
CHD1O14646 RNU6-562P-201ENST00000362731 107 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 RNU6-756P-201ENST00000383997 107 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 MIR10A-201ENST00000385043 110 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 AC106883.1-201ENST00000418805 562 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.65□□□□□ -2.51
CHD1O14646 AL590632.1-201ENST00000424289 371 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.65□□□□□ -2.51
CHD1O14646 RNU7-159P-201ENST00000459284 62 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms