Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 MIR5047-201ENST00000579212 100 ntBASIC3.34□□□□□ -1.87
RFXAPO00287 RNA5SP108-201ENST00000605921 117 ntBASIC3.34□□□□□ -1.87
RFXAPO00287 AL078604.3-201ENST00000615580 211 ntBASIC3.34□□□□□ -1.87
RFXAPO00287 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.34□□□□□ -1.88
RFXAPO00287 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RFXAPO00287 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RFXAPO00287 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFXAPO00287 AC092268.1-201ENST00000342691 405 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 AC062016.1-201ENST00000355719 319 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 RNU6-834P-201ENST00000362367 110 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 RNU6-103P-201ENST00000363686 107 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 Y_RNA.337-201ENST00000365312 102 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 SNORD67-201ENST00000390833 111 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 AL031003.1-201ENST00000404229 172 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
RFXAPO00287 AC105272.1-201ENST00000438604 198 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
RFXAPO00287 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.33□□□□□ -1.88
RFXAPO00287 AC007215.1-201ENST00000464893 276 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.33□□□□□ -1.88
RFXAPO00287 RPS27AP10-201ENST00000496103 208 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 RNU2-56P-201ENST00000516826 190 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 AC136628.3-201ENST00000521868 290 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.33□□□□□ -1.88
RFXAPO00287 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.33□□□□□ -1.88
RFXAPO00287 Y_RNA.802-201ENST00000614892 130 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 TUG1_4.1-201ENST00000619464 181 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
RFXAPO00287 AC012640.5-201ENST00000623897 319 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
RFXAPO00287 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.33□□□□□ -1.88
RFXAPO00287 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.33□□□□□ -1.88
RFXAPO00287 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RFXAPO00287 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFXAPO00287 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFXAPO00287 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFXAPO00287 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFXAPO00287 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RFXAPO00287 SNORD115-30-201ENST00000364117 82 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 SNORA18.3-201ENST00000384122 132 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 SNORA8.3-201ENST00000384679 139 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 RNU6-1248P-201ENST00000391096 64 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 RNU6-588P-201ENST00000410281 105 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.32□□□□□ -1.88
RFXAPO00287 AL139281.1-201ENST00000422120 335 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 HMGN2P30-201ENST00000423237 256 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 AC078809.1-201ENST00000427601 140 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.32□□□□□ -1.88
RFXAPO00287 RPL23AP58-201ENST00000440453 469 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 AL645939.1-201ENST00000453429 797 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 RPL31P41-201ENST00000477967 372 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.32□□□□□ -1.88
RFXAPO00287 RNU6-107P-201ENST00000516643 102 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 Y_RNA.709-201ENST00000516952 92 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.32□□□□□ -1.88
RFXAPO00287 uc_338.25-201ENST00000613756 156 ntBASIC3.32□□□□□ -1.88
RFXAPO00287 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
RFXAPO00287 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFXAPO00287 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFXAPO00287 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFXAPO00287 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.32□□□□□ -1.88
RFXAPO00287 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFXAPO00287 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RFXAPO00287 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFXAPO00287 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFXAPO00287 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
RFXAPO00287 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.31□□□□□ -1.88
RFXAPO00287 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFXAPO00287 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFXAPO00287 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 RNU6-235P-201ENST00000362644 107 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 Y_RNA.287-201ENST00000364853 94 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 RNU6-1180P-201ENST00000364935 107 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 RNU6-1336P-201ENST00000383886 109 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 RNU6-147P-201ENST00000383983 107 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 RNU6-643P-201ENST00000384018 107 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 SNORD15B-201ENST00000384714 146 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 MIR124-3-201ENST00000384866 87 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 MIR15B-201ENST00000385045 98 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 RNU6-1197P-201ENST00000391183 107 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 RNA5SP475-201ENST00000410568 110 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 AL158823.1-201ENST00000418441 478 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.31□□□□□ -1.88
RFXAPO00287 AL121914.1-201ENST00000450188 156 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.31□□□□□ -1.88
RFXAPO00287 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.31□□□□□ -1.88
RFXAPO00287 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.31□□□□□ -1.88
RFXAPO00287 AP004242.1-201ENST00000533701 349 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 CYCSP26-201ENST00000534107 320 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.31□□□□□ -1.88
RFXAPO00287 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 AC023043.3-201ENST00000593113 385 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RFXAPO00287 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.31□□□□□ -1.88
RFXAPO00287 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFXAPO00287 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms