Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.83□□□□□ -2.28
DFFAO00273 HSPE1P13-201ENST00000451143 297 ntBASIC0.83□□□□□ -2.28
DFFAO00273 SNORA31.10-201ENST00000516482 106 ntBASIC0.83□□□□□ -2.28
DFFAO00273 MTCO2P4-201ENST00000517968 247 ntBASIC0.83□□□□□ -2.28
DFFAO00273 MRPS36P4-201ENST00000534436 298 ntBASIC0.83□□□□□ -2.28
DFFAO00273 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.83□□□□□ -2.28
DFFAO00273 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.83□□□□□ -2.28
DFFAO00273 MIR4424-201ENST00000585257 86 ntBASIC0.83□□□□□ -2.28
DFFAO00273 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.83□□□□□ -2.28
DFFAO00273 AC146944.4-201ENST00000602697 718 ntBASIC0.83□□□□□ -2.28
DFFAO00273 AC136443.5-201ENST00000603741 370 ntBASIC0.83□□□□□ -2.28
DFFAO00273 SNRPGP20-201ENST00000604477 205 ntBASIC0.83□□□□□ -2.28
DFFAO00273 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
DFFAO00273 AC097065.2-201ENST00000608159 533 ntBASIC0.83□□□□□ -2.28
DFFAO00273 RMST_3.1-201ENST00000611651 109 ntBASIC0.83□□□□□ -2.28
DFFAO00273 AC008873.1-201ENST00000625051 138 ntBASIC0.83□□□□□ -2.28
DFFAO00273 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.83□□□□□ -2.28
DFFAO00273 U6.108-201ENST00000637764 58 ntBASIC0.83□□□□□ -2.28
DFFAO00273 Y_RNA.123-201ENST00000363338 102 ntBASIC0.82□□□□□ -2.28
DFFAO00273 SNORD114-22-201ENST00000365423 72 ntBASIC0.82□□□□□ -2.28
DFFAO00273 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
DFFAO00273 RNU11-5P-201ENST00000391216 129 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AL606923.1-201ENST00000406616 190 ntBASIC0.82□□□□□ -2.28
DFFAO00273 RAB28P5-201ENST00000427490 651 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AF186996.7-201ENST00000492781 209 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.82□□□□□ -2.28
DFFAO00273 RNU6-189P-201ENST00000516120 101 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AC087854.1-201ENST00000519706 414 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AC104576.1-201ENST00000524225 88 ntBASIC0.82□□□□□ -2.28
DFFAO00273 SCOCP1-201ENST00000554676 349 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.82□□□□□ -2.28
DFFAO00273 FGF7P1-201ENST00000582820 288 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AC004223.2-201ENST00000590309 544 ntBASIC0.82□□□□□ -2.28
DFFAO00273 AL390123.1-201ENST00000603216 237 ntBASIC0.82□□□□□ -2.28
DFFAO00273 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
DFFAO00273 AL078596.1-201ENST00000624856 447 ntBASIC0.82□□□□□ -2.28
DFFAO00273 snoZ196.1-201ENST00000625269 89 ntBASIC0.82□□□□□ -2.28
DFFAO00273 FER-210ENST00000628534 558 ntTSL 5 BASIC0.82□□□□□ -2.28
DFFAO00273 SNORA25.9-201ENST00000365087 128 ntBASIC0.81□□□□□ -2.28
DFFAO00273 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.81□□□□□ -2.28
DFFAO00273 SNORA67.2-201ENST00000384300 149 ntBASIC0.81□□□□□ -2.28
DFFAO00273 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
DFFAO00273 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.81□□□□□ -2.28
DFFAO00273 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.81□□□□□ -2.28
DFFAO00273 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.81□□□□□ -2.28
DFFAO00273 AC008134.1-201ENST00000420943 193 ntBASIC0.81□□□□□ -2.28
DFFAO00273 MTCO2P18-201ENST00000457151 658 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AC092991.1-201ENST00000477176 376 ntBASIC0.81□□□□□ -2.28
DFFAO00273 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
DFFAO00273 RNU1-142P-201ENST00000516682 145 ntBASIC0.81□□□□□ -2.28
DFFAO00273 SNORA70.22-201ENST00000517160 124 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AC025647.1-201ENST00000517879 253 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.81□□□□□ -2.28
DFFAO00273 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.81□□□□□ -2.28
DFFAO00273 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.81□□□□□ -2.28
DFFAO00273 MIR5695-201ENST00000579717 85 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AC040904.1-201ENST00000590850 223 ntBASIC0.81□□□□□ -2.28
DFFAO00273 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AC022217.4-201ENST00000604389 163 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AL359075.3-201ENST00000613288 217 ntBASIC0.81□□□□□ -2.28
DFFAO00273 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AC068792.1-201ENST00000621354 417 ntBASIC0.81□□□□□ -2.28
DFFAO00273 AC091931.1-201ENST00000623488 728 ntBASIC0.81□□□□□ -2.28
DFFAO00273 SCARNA4-201ENST00000629045 128 ntBASIC0.81□□□□□ -2.28
DFFAO00273 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
DFFAO00273 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.8□□□□□ -2.28
DFFAO00273 RNU6-1329P-201ENST00000365664 107 ntBASIC0.8□□□□□ -2.28
DFFAO00273 MIR520E-201ENST00000384867 87 ntBASIC0.8□□□□□ -2.28
DFFAO00273 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
DFFAO00273 MIR320B2-201ENST00000408479 138 ntBASIC0.8□□□□□ -2.28
DFFAO00273 RN7SKP200-201ENST00000410564 320 ntBASIC0.8□□□□□ -2.28
DFFAO00273 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.8□□□□□ -2.28
DFFAO00273 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.8□□□□□ -2.28
DFFAO00273 RNU6-221P-201ENST00000459541 99 ntBASIC0.8□□□□□ -2.28
DFFAO00273 AC025423.5-201ENST00000550230 219 ntBASIC0.8□□□□□ -2.28
DFFAO00273 AC136932.1-201ENST00000574771 208 ntBASIC0.8□□□□□ -2.28
DFFAO00273 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
DFFAO00273 MIR6504-201ENST00000613520 61 ntBASIC0.8□□□□□ -2.28
DFFAO00273 AC103705.1-201ENST00000619013 241 ntBASIC0.8□□□□□ -2.28
DFFAO00273 MIR8054-201ENST00000620877 86 ntBASIC0.8□□□□□ -2.28
DFFAO00273 OR5AK4P-201ENST00000635912 903 ntBASIC0.8□□□□□ -2.28
DFFAO00273 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
DFFAO00273 RNU6-1240P-201ENST00000365155 104 ntBASIC0.79□□□□□ -2.28
DFFAO00273 RNU5A-6P-201ENST00000384136 116 ntBASIC0.79□□□□□ -2.28
DFFAO00273 RNU6-505P-201ENST00000384427 107 ntBASIC0.79□□□□□ -2.28
DFFAO00273 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
DFFAO00273 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
DFFAO00273 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.79□□□□□ -2.28
DFFAO00273 TPTE2P5-203ENST00000458118 728 ntBASIC0.79□□□□□ -2.28
DFFAO00273 SRRM1P2-201ENST00000464531 1192 ntBASIC0.79□□□□□ -2.28
DFFAO00273 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.79□□□□□ -2.28
DFFAO00273 SNORA31.2-201ENST00000516019 134 ntBASIC0.79□□□□□ -2.28
DFFAO00273 SNORA31.4-201ENST00000516049 129 ntBASIC0.79□□□□□ -2.28
DFFAO00273 RNU6-344P-201ENST00000516635 111 ntBASIC0.79□□□□□ -2.28
DFFAO00273 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.79□□□□□ -2.28
DFFAO00273 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
DFFAO00273 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.79□□□□□ -2.28
DFFAO00273 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
DFFAO00273 AC087683.1-201ENST00000591187 441 ntBASIC0.79□□□□□ -2.28
DFFAO00273 AL354950.2-201ENST00000617939 290 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms