Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MIR5094-201ENST00000578766 85 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.57□□□□□ -2.16
PDLIM1O00151 AC104984.5-201ENST00000586878 94 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AC011712.1-201ENST00000588959 234 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.57□□□□□ -2.16
PDLIM1O00151 AC084782.3-201ENST00000612282 578 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 MIR6715A-201ENST00000615929 79 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 WWP1P1-201ENST00000466609 2769 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 U8.10-201ENST00000384260 133 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 MIR153-2-201ENST00000385225 87 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 USP9YP30-201ENST00000430729 455 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 AL591806.2-201ENST00000433122 173 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 AC016717.1-201ENST00000448918 286 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 MTND1P17-201ENST00000448961 204 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.56□□□□□ -2.16
PDLIM1O00151 ATP5J2P3-201ENST00000451550 258 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.56□□□□□ -2.16
PDLIM1O00151 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.56□□□□□ -2.16
PDLIM1O00151 AC082651.2-201ENST00000496833 166 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 AC018710.1-201ENST00000506509 158 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 RNU6-948P-201ENST00000516374 107 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 RNU6-358P-201ENST00000516564 75 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 AC022254.1-201ENST00000567857 235 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 SNORA59B-202ENST00000578183 701 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
PDLIM1O00151 RNU6-1059P-201ENST00000363752 98 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 SNORD115-32-201ENST00000364079 82 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 Y_RNA.533-201ENST00000384596 114 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 AC004866.1-201ENST00000411748 78 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 RPL30P16-201ENST00000419341 429 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 AC074290.1-201ENST00000448883 135 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 RPL23AP63-201ENST00000498752 471 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 AC067942.3-201ENST00000512025 362 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 RNU7-175P-201ENST00000515915 61 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 RNU6-1041P-201ENST00000516254 102 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 RNU1-117P-201ENST00000517041 158 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 RNU6-58P-201ENST00000517143 103 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 MIR3683-201ENST00000580847 82 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 MIR4742-201ENST00000581069 85 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 AC092794.1-201ENST00000612734 582 ntBASIC1.55□□□□□ -2.16
PDLIM1O00151 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.55□□□□□ -2.16
PDLIM1O00151 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PDLIM1O00151 Y_RNA.319-201ENST00000365138 92 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 RNA5SP100-201ENST00000410903 110 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 RNA5SP59-201ENST00000410922 110 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 MTND3P8-201ENST00000412909 339 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.54□□□□□ -2.16
PDLIM1O00151 AC009310.1-201ENST00000414414 451 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 RPL21P111-201ENST00000418453 477 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 AL445305.1-201ENST00000432577 575 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 HMGN2P23-201ENST00000456759 269 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 SNORA25.14-201ENST00000516481 132 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.54□□□□□ -2.16
PDLIM1O00151 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.54□□□□□ -2.16
PDLIM1O00151 MIR5696-201ENST00000578474 85 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.54□□□□□ -2.16
PDLIM1O00151 AC060780.3-201ENST00000589464 80 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 AC022513.1-201ENST00000624512 117 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 AL133216.2-202ENST00000634512 349 ntBASIC1.54□□□□□ -2.16
PDLIM1O00151 Y_RNA.48-201ENST00000362710 103 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 RNU6-862P-201ENST00000362804 105 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 RNU6-596P-201ENST00000365395 98 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 AL356776.1-201ENST00000406574 447 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 RNU6-174P-201ENST00000410406 106 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 AC074085.1-201ENST00000413598 418 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 RNU7-57P-201ENST00000459540 60 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 RPL30P10-201ENST00000488148 337 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 MTND5P5-201ENST00000503764 376 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 RNU2-34P-201ENST00000516534 121 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PDLIM1O00151 AL590705.4-201ENST00000532209 134 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 SUB1P4-201ENST00000566062 339 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.53□□□□□ -2.16
PDLIM1O00151 AC103810.8-201ENST00000607347 118 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 AL078596.1-201ENST00000624856 447 ntBASIC1.53□□□□□ -2.16
PDLIM1O00151 Y_RNA.72-201ENST00000362894 103 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 SNORD115-8-201ENST00000363856 82 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 RNU1-96P-201ENST00000364163 162 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 SNORD115-38-201ENST00000365037 82 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 RNU6-245P-201ENST00000384020 107 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 RNU6-975P-201ENST00000384296 105 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 MIR548F5-201ENST00000408421 86 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 Y_RNA.599-201ENST00000410489 109 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 AC060773.1-201ENST00000421698 310 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.52□□□□□ -2.17
PDLIM1O00151 SDAD1P3-201ENST00000427380 333 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 FGF7P6-202ENST00000451282 293 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 RN7SKP210-201ENST00000459176 261 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 HMGN2P9-201ENST00000476875 229 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 AC011406.1-201ENST00000512440 370 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.52□□□□□ -2.17
PDLIM1O00151 RNU6-856P-201ENST00000516959 98 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms