Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNA5SP94-201ENST00000516917 108 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 U2.21-201ENST00000637295 81 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 AC132825.6-201ENST00000638861 357 ntBASIC-0.67□□□□□ -2.52
COL6A5A8TX70 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 SNORA1-201ENST00000384107 130 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 MRPS10P2-201ENST00000431226 381 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC111193.1-201ENST00000504097 155 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC027338.1-201ENST00000514840 825 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNU6-319P-201ENST00000516025 108 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNU6-180P-201ENST00000516697 61 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC011979.2-201ENST00000527568 352 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC131159.1-201ENST00000621854 213 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 MIR7-1-201ENST00000384871 110 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC244250.2-201ENST00000418731 148 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 HSFY7P-201ENST00000432672 318 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 HSFY8P-201ENST00000437934 318 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 HSFY5P-201ENST00000453726 309 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNA5SP481-201ENST00000516814 122 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC079598.5-201ENST00000547460 117 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC093249.1-201ENST00000567049 203 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AL391840.1-201ENST00000571144 367 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC021851.1-201ENST00000608537 1082 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC073968.1-201ENST00000618594 637 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC009269.6-201ENST00000621778 588 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 MTND4P8-201ENST00000514997 1362 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNU6-621P-201ENST00000364752 109 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNU6-140P-201ENST00000384566 108 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AL034345.1-201ENST00000407768 123 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNA5SP475-201ENST00000410568 110 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RPL21P38-201ENST00000418090 167 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC079140.3-201ENST00000511111 550 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNU6-965P-201ENST00000516721 96 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 RNA5SP66-201ENST00000517178 101 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AP000763.2-201ENST00000540641 163 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 CR383656.7-201ENST00000548164 174 ntBASIC-0.68□□□□□ -2.52
COL6A5A8TX70 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.68□□□□□ -2.52
COL6A5A8TX70 MTND4P9-201ENST00000507819 1346 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 SNORA8.2-201ENST00000384372 139 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC009237.7-201ENST00000447357 229 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC005042.3-201ENST00000453230 174 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC022364.2-201ENST00000457963 554 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.69□□□□□ -2.52
COL6A5A8TX70 RNU7-129P-201ENST00000516128 62 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC098483.2-201ENST00000603158 454 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC015726.2-201ENST00000620112 122 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC104820.1-201ENST00000624183 307 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 RNU6-393P-201ENST00000384475 107 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 MIR520G-201ENST00000385064 90 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 MIR520H-201ENST00000385126 88 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AL031667.1-201ENST00000440222 725 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AC022137.1-201ENST00000483735 151 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 RPS23P5-201ENST00000495419 428 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 BNIP3P6-201ENST00000549284 499 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 AP002360.4-201ENST00000606980 481 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 RMST_4.1-201ENST00000616886 107 ntBASIC-0.69□□□□□ -2.52
COL6A5A8TX70 RNU6-901P-201ENST00000384593 106 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 MIR509-1-201ENST00000385265 94 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 MIR509-2-201ENST00000390724 91 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 RNU2-43P-201ENST00000410306 190 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 ZNF885P-201ENST00000420174 1098 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 USP9YP11-201ENST00000427537 717 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.7□□□□□ -2.52
COL6A5A8TX70 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.7□□□□□ -2.52
COL6A5A8TX70 RNU5A-1-201ENST00000362698 116 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 SNORD65-201ENST00000391079 73 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 COX6CP10-201ENST00000416832 224 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 MIR4756-201ENST00000577874 78 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 AP001981.2-201ENST00000603241 418 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 AL034555.1-201ENST00000604816 211 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 AC018926.1-201ENST00000616335 435 ntBASIC-0.7□□□□□ -2.52
COL6A5A8TX70 AC105081.1-201ENST00000617727 106 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms