Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SNORD56.1-201ENST00000362913 68 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 Y_RNA.150-201ENST00000363562 102 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 Y_RNA.297-201ENST00000364950 91 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 RNU6-1286P-201ENST00000383871 107 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 RNU6-318P-201ENST00000384283 103 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 MIR27B-201ENST00000385129 97 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 SNORD78.2-201ENST00000391076 69 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
C4orf47A7E2U8 RNU6-1245P-201ENST00000411130 106 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 AL139156.1-201ENST00000412785 841 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.54□□□□□ -2
C4orf47A7E2U8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.54□□□□□ -2
C4orf47A7E2U8 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
C4orf47A7E2U8 RN7SL499P-201ENST00000481141 276 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 AF186996.7-201ENST00000492781 209 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 RNU4-71P-201ENST00000516258 113 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 ACA59.2-201ENST00000517061 156 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 AC009163.5-201ENST00000575421 637 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 MIR3616-201ENST00000584070 92 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.54□□□□□ -2
C4orf47A7E2U8 BX284668.6-201ENST00000606899 438 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 AC004792.1-201ENST00000614523 137 ntBASIC2.54□□□□□ -2
C4orf47A7E2U8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.54□□□□□ -2
C4orf47A7E2U8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.54□□□□□ -2
C4orf47A7E2U8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
C4orf47A7E2U8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
C4orf47A7E2U8 Y_RNA.29-201ENST00000362570 113 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 RNU6-926P-201ENST00000384075 107 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 MIR32-201ENST00000384965 70 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.53□□□□□ -2
C4orf47A7E2U8 RNA5SP213-201ENST00000391031 106 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 RNA5SP247-201ENST00000411181 105 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.53□□□□□ -2
C4orf47A7E2U8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.53□□□□□ -2
C4orf47A7E2U8 EIF1P2-201ENST00000428233 350 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.53□□□□□ -2
C4orf47A7E2U8 AC016700.2-201ENST00000446011 156 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 AP000870.1-201ENST00000472927 406 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 MED28P2-201ENST00000475771 317 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.53□□□□□ -2
C4orf47A7E2U8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.53□□□□□ -2
C4orf47A7E2U8 RNU6-496P-201ENST00000516145 99 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 RNA5SP76-201ENST00000516277 87 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 SNORA31.23-201ENST00000517219 133 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.53□□□□□ -2
C4orf47A7E2U8 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 AC024581.2-201ENST00000619986 252 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 MIR7515-201ENST00000637837 67 ntBASIC2.53□□□□□ -2
C4orf47A7E2U8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.53□□□□□ -2
C4orf47A7E2U8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
C4orf47A7E2U8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
C4orf47A7E2U8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C4orf47A7E2U8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 Y_RNA.180-201ENST00000363867 113 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 SNORD115-32-201ENST00000364079 82 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 SNORD32A-201ENST00000364805 84 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 RNU6-843P-201ENST00000384454 104 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 MIR548M-201ENST00000408260 86 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.52□□□□□ -2.01
C4orf47A7E2U8 AC007969.2-201ENST00000441891 191 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 HSPE1P25-201ENST00000455484 251 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 AC087477.1-201ENST00000465747 340 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 AC090115.4-201ENST00000609970 188 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 RMST_6.1-201ENST00000611980 203 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 SNORA43.4-201ENST00000629559 138 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.52□□□□□ -2.01
C4orf47A7E2U8 MIR3529-201ENST00000637713 78 ntBASIC2.52□□□□□ -2.01
C4orf47A7E2U8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C4orf47A7E2U8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
C4orf47A7E2U8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
C4orf47A7E2U8 RNA5SP361-201ENST00000362686 118 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 Y_RNA.200-201ENST00000364018 102 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 RNU6-879P-201ENST00000364328 108 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 RNU6-290P-201ENST00000365212 101 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 SNORA29-201ENST00000384183 140 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 MIR487A-201ENST00000385009 80 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.51□□□□□ -2.01
C4orf47A7E2U8 PTGES3P4-201ENST00000426243 356 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 AL356320.1-201ENST00000429616 163 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.51□□□□□ -2.01
C4orf47A7E2U8 AC012308.1-201ENST00000451232 178 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.51□□□□□ -2.01
C4orf47A7E2U8 SERF1AP1-201ENST00000514575 187 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 RNU5F-8P-201ENST00000515941 111 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 SCARNA11.3-201ENST00000517276 130 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.51□□□□□ -2.01
C4orf47A7E2U8 AL359198.2-201ENST00000611836 194 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 U2.14-201ENST00000615943 113 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 MIR6733-201ENST00000635723 61 ntBASIC2.51□□□□□ -2.01
C4orf47A7E2U8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms