Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 RNA5SP137-201ENST00000516833 135 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 RNU6-1198P-201ENST00000516904 67 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 Y_RNA.706-201ENST00000516933 99 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.95□□□□□ -2.1
SHISA7A6NL88 CYP4A27P-201ENST00000567218 190 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 AC007229.1-201ENST00000590455 412 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 Z98751.3-201ENST00000604447 521 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 AL132822.1-201ENST00000617063 513 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.95□□□□□ -2.1
SHISA7A6NL88 SCARNA4-201ENST00000629045 128 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.95□□□□□ -2.1
SHISA7A6NL88 SNORA43.4-201ENST00000629559 138 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
SHISA7A6NL88 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.94□□□□□ -2.1
SHISA7A6NL88 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC006026.1-201ENST00000444025 1803 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.94□□□□□ -2.1
SHISA7A6NL88 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SHISA7A6NL88 RNU6-490P-201ENST00000362985 107 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 SNORD32B-201ENST00000364460 84 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 Y_RNA.579-201ENST00000390939 94 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AL627390.1-201ENST00000396055 340 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 MIR320B2-201ENST00000408479 138 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AP1B1P2-201ENST00000416196 106 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC243428.1-201ENST00000421099 264 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 snoU13.30-201ENST00000458951 104 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC087477.1-201ENST00000465747 340 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC027575.1-201ENST00000481064 460 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 RPL30P10-201ENST00000488148 337 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 RPL23AP75-201ENST00000491601 451 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 RNU6-470P-201ENST00000515954 104 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 RNU6-667P-201ENST00000517186 102 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC091144.1-201ENST00000519573 138 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 MRPS36P4-201ENST00000534436 298 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.94□□□□□ -2.1
SHISA7A6NL88 SNRPGP17-201ENST00000603780 214 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC100812.1-201ENST00000607622 580 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC022202.1-201ENST00000613515 211 ntBASIC1.94□□□□□ -2.1
SHISA7A6NL88 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
SHISA7A6NL88 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.93□□□□□ -2.1
SHISA7A6NL88 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
SHISA7A6NL88 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SHISA7A6NL88 SNORD115-32-201ENST00000364079 82 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 Y_RNA.419-201ENST00000384041 102 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 RNU6-541P-201ENST00000384709 110 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 MIR625-201ENST00000385047 85 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 MIR153-2-201ENST00000385225 87 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 MIR208B-201ENST00000401172 77 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 RNA5SP201-201ENST00000410316 124 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 AC099799.1-201ENST00000439809 192 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 RNU6-976P-201ENST00000516086 111 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.93□□□□□ -2.1
SHISA7A6NL88 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.93□□□□□ -2.1
SHISA7A6NL88 AC233702.2-202ENST00000562547 291 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 AC104581.2-201ENST00000572227 430 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 AC026271.5-201ENST00000577873 130 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 RMST_6.1-201ENST00000611980 203 ntBASIC1.93□□□□□ -2.1
SHISA7A6NL88 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SHISA7A6NL88 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SHISA7A6NL88 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SHISA7A6NL88 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
SHISA7A6NL88 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
SHISA7A6NL88 RNU5B-2P-201ENST00000363036 113 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 RNU5F-3P-201ENST00000363767 117 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 U3.9-201ENST00000363823 204 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 Y_RNA.428-201ENST00000384078 102 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 Y_RNA.577-201ENST00000384794 101 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 MIR1294-201ENST00000408503 142 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 AF228730.4-201ENST00000421457 183 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 MTCO2P12-201ENST00000427426 682 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 AC092423.1-201ENST00000430165 186 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 OR2AQ1P-201ENST00000451972 200 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 MIR2053-201ENST00000459295 91 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 snoU13.18-201ENST00000459483 104 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.92□□□□□ -2.1
SHISA7A6NL88 AC107032.1-201ENST00000485945 480 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 RNU7-4P-201ENST00000516961 62 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 AC023442.1-201ENST00000531247 422 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 SUB1P3-201ENST00000564581 315 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 AC004584.2-201ENST00000570407 410 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 MIR4255-201ENST00000579351 72 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 AC005014.2-201ENST00000607795 599 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 AC005520.5-201ENST00000613926 164 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.92□□□□□ -2.1
SHISA7A6NL88 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SHISA7A6NL88 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
SHISA7A6NL88 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SHISA7A6NL88 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SHISA7A6NL88 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SHISA7A6NL88 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms