Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC091895.1-201ENST00000624494 256 ntBASIC2.61□□□□□ -1.99
CGB1A6NKQ9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.61□□□□□ -1.99
CGB1A6NKQ9 AL355596.1-201ENST00000565399 3996 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 RNU6-727P-201ENST00000363592 107 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 RNU4-84P-201ENST00000364200 139 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 Y_RNA.568-201ENST00000384742 113 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 MIR554-201ENST00000384874 96 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 MIR218-2-201ENST00000385006 110 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 MIR549A-201ENST00000385268 96 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 FO393413.1-201ENST00000402892 195 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 SNORA11-201ENST00000408789 128 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC092427.1-202ENST00000430569 476 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AL162725.1-201ENST00000435405 301 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 CST9LP2-201ENST00000437612 320 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 RNU6-313P-201ENST00000516317 112 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC023632.4-201ENST00000517783 191 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 MIR1254-2-201ENST00000579553 63 ntBASIC2.6□□□□□ -1.99
CGB1A6NKQ9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CGB1A6NKQ9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CGB1A6NKQ9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RNU6-486P-201ENST00000363116 107 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 Y_RNA.182-201ENST00000363880 111 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RNU6-324P-201ENST00000363957 106 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 Y_RNA.215-201ENST00000364204 112 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 Y_RNA.329-201ENST00000365209 107 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 Y_RNA.412-201ENST00000384001 104 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 MIR134-201ENST00000385258 73 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RNU6-131P-201ENST00000391144 107 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 CBX3P9-201ENST00000402326 552 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RPS29P4-201ENST00000414733 161 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.59□□□□□ -1.99
CGB1A6NKQ9 SEPT7P4-201ENST00000437076 306 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AC115115.1-201ENST00000449927 248 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RPS20P10-201ENST00000451209 253 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AC008155.2-201ENST00000464337 397 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AC103975.1-201ENST00000482506 483 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 SCARNA3-201ENST00000517097 143 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AP002001.1-203ENST00000534002 267 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AC079598.5-201ENST00000547460 117 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AL034555.1-201ENST00000604816 211 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AL449363.1-201ENST00000617815 186 ntBASIC2.59□□□□□ -1.99
CGB1A6NKQ9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.59□□□□□ -1.99
CGB1A6NKQ9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.59□□□□□ -2
CGB1A6NKQ9 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.59□□□□□ -2
CGB1A6NKQ9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -2
CGB1A6NKQ9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.58□□□□□ -2
CGB1A6NKQ9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.58□□□□□ -2
CGB1A6NKQ9 RNA5SP383-201ENST00000362934 120 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 RNU6-805P-201ENST00000365643 106 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 AL357075.1-201ENST00000404107 726 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 U6atac.2-201ENST00000408644 118 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 AC097463.2-201ENST00000421074 142 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.58□□□□□ -2
CGB1A6NKQ9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.58□□□□□ -2
CGB1A6NKQ9 Y_RNA.637-201ENST00000459424 114 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 AC080013.2-201ENST00000460866 323 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.58□□□□□ -2
CGB1A6NKQ9 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 RNU2-12P-201ENST00000517216 168 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.58□□□□□ -2
CGB1A6NKQ9 AC100767.1-201ENST00000528178 123 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.58□□□□□ -2
CGB1A6NKQ9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.58□□□□□ -2
CGB1A6NKQ9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
CGB1A6NKQ9 AC027176.1-201ENST00000560204 514 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 MIR3684-201ENST00000579779 74 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 MIR4276-201ENST00000584832 70 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.58□□□□□ -2
CGB1A6NKQ9 AL078604.3-201ENST00000615580 211 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 MIR7153-201ENST00000637758 57 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.58□□□□□ -2
CGB1A6NKQ9 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
CGB1A6NKQ9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CGB1A6NKQ9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CGB1A6NKQ9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.57□□□□□ -2
CGB1A6NKQ9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.57□□□□□ -2
CGB1A6NKQ9 RNU6-1290P-201ENST00000362957 109 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 RNU6-275P-201ENST00000364910 107 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 RNU6-1154P-201ENST00000391001 104 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 265.9 ms