Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.5□□□□□ -2.17
SYCE3A1L190 AC015688.6-201ENST00000577737 104 ntBASIC1.5□□□□□ -2.17
SYCE3A1L190 MIR3683-201ENST00000580847 82 ntBASIC1.5□□□□□ -2.17
SYCE3A1L190 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
SYCE3A1L190 AL050343.2-201ENST00000607338 280 ntBASIC1.5□□□□□ -2.17
SYCE3A1L190 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SYCE3A1L190 ZNF204P-201ENST00000416749 2397 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYCE3A1L190 RNU6-451P-201ENST00000362921 107 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RNU1-17P-201ENST00000363022 152 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 Y_RNA.140-201ENST00000363474 103 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 Y_RNA.151-201ENST00000363566 112 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 SNORD115-8-201ENST00000363856 82 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 Y_RNA.287-201ENST00000364853 94 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RNU6-534P-201ENST00000364877 106 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 SNORD115-38-201ENST00000365037 82 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RNU6-95P-201ENST00000384697 107 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 MIR320B2-201ENST00000408479 138 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 AL353572.1-201ENST00000442490 417 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 Z83846.1-201ENST00000446798 265 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RNU7-66P-201ENST00000459469 62 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RNU7-57P-201ENST00000459540 60 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 TRBVA-201ENST00000498804 316 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 MTCYBP18-201ENST00000501056 747 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RNU6-1146P-201ENST00000516282 102 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 RNA5SP54-201ENST00000516951 92 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.49□□□□□ -2.17
SYCE3A1L190 ZNF519P2-201ENST00000557032 169 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 AL138726.1-201ENST00000614873 333 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 MIR8063-201ENST00000621930 81 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 MIR1321-201ENST00000637766 79 ntBASIC1.49□□□□□ -2.17
SYCE3A1L190 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYCE3A1L190 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYCE3A1L190 RNY3P3-201ENST00000363816 102 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 Y_RNA.194-201ENST00000363985 102 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 Y_RNA.530-201ENST00000384587 101 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 Y_RNA.559-201ENST00000384686 107 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 MIR515-2-201ENST00000384883 83 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 MIR515-1-201ENST00000384884 83 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 RNU6-174P-201ENST00000410406 106 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 AC074290.1-201ENST00000448883 135 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 SNORD13-201ENST00000459299 104 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.48□□□□□ -2.17
SYCE3A1L190 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.48□□□□□ -2.17
SYCE3A1L190 MTND1P5-201ENST00000517906 940 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.48□□□□□ -2.17
SYCE3A1L190 MIR4742-201ENST00000581069 85 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
SYCE3A1L190 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYCE3A1L190 SNORD33-201ENST00000362761 85 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 SNORD115-32-201ENST00000364079 82 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 SNORA4.2-201ENST00000365313 147 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 RNU6-245P-201ENST00000384020 107 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SYCE3A1L190 RNA5SP504-201ENST00000410676 117 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 AC016909.1-201ENST00000415916 166 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 MTCO3P18-201ENST00000440206 761 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.47□□□□□ -2.17
SYCE3A1L190 PCMTD1P1-201ENST00000455560 355 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 MTCO2P30-201ENST00000503662 364 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 AC079140.2-201ENST00000506193 142 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 AC048344.4-201ENST00000619744 527 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 AC006001.4-201ENST00000622243 395 ntBASIC1.47□□□□□ -2.17
SYCE3A1L190 Y_RNA.38-201ENST00000362617 102 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 RNU6-1252P-201ENST00000363054 104 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 Y_RNA.135-201ENST00000363439 95 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 RNU6-790P-201ENST00000384479 105 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 RNU6-417P-201ENST00000384712 107 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AL590002.1-201ENST00000406554 418 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 RNU6-57P-201ENST00000411348 103 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 ZNF885P-201ENST00000420174 1098 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.46□□□□□ -2.18
SYCE3A1L190 AL590632.1-201ENST00000424289 371 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AC024995.1-201ENST00000523014 93 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.46□□□□□ -2.18
SYCE3A1L190 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.46□□□□□ -2.18
SYCE3A1L190 AC005668.1-201ENST00000571142 476 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AC023043.2-201ENST00000589678 1026 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AC103591.3-201ENST00000608684 209 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AL078596.1-201ENST00000624856 447 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 snoZ196.1-201ENST00000625269 89 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.46□□□□□ -2.18
SYCE3A1L190 AC091812.1-201ENST00000432235 1948 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 MTND5P35-201ENST00000557537 1720 ntBASIC1.46□□□□□ -2.18
SYCE3A1L190 Y_RNA.41-201ENST00000362646 102 ntBASIC1.45□□□□□ -2.18
SYCE3A1L190 RNU4-9P-201ENST00000364951 139 ntBASIC1.45□□□□□ -2.18
SYCE3A1L190 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SYCE3A1L190 MTND3P21-201ENST00000433774 331 ntBASIC1.45□□□□□ -2.18
SYCE3A1L190 Z82188.1-201ENST00000436709 154 ntBASIC1.45□□□□□ -2.18
SYCE3A1L190 DAP3P1-201ENST00000441522 278 ntBASIC1.45□□□□□ -2.18
SYCE3A1L190 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms