Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RNU6-264P-201ENST00000517134 104 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC080078.3-201ENST00000605407 463 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR1244-1-201ENST00000612829 85 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC104985.2-201ENST00000620598 500 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR1244-3-201ENST00000635744 85 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR1244-2-201ENST00000636449 85 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR1244-4-202ENST00000636813 85 ntBASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TRBV4-1A0A0J9YWV2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-490P-201ENST00000362985 107 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNORD115-3-201ENST00000363100 82 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-525P-201ENST00000363685 104 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNORA67.3-201ENST00000384366 140 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.557-201ENST00000384680 107 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNA5SP465-201ENST00000391195 109 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-1156P-201ENST00000410365 100 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNA5SP450-201ENST00000411206 102 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC022028.1-201ENST00000412054 408 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC092423.1-201ENST00000430165 186 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC091179.3-201ENST00000474761 144 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR3169-201ENST00000578032 83 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR5695-201ENST00000579717 85 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC125232.2-201ENST00000592457 143 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNORD11B-201ENST00000607707 90 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC087588.2-201ENST00000617667 426 ntBASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC009487.4-201ENST00000624969 3585 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNA5SP493-201ENST00000364115 91 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SNORA16B-201ENST00000364674 135 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-793P-201ENST00000384233 104 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-975P-201ENST00000384296 105 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC139712.2-201ENST00000424302 339 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL357134.1-201ENST00000445848 426 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 U8.22-201ENST00000459141 133 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC067942.3-201ENST00000512025 362 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR4753-201ENST00000585119 83 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL133255.1-201ENST00000606374 441 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC005296.1-201ENST00000616145 209 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL590240.4-201ENST00000616908 390 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC068205.3-201ENST00000636385 468 ntBASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU6-1115P-201ENST00000362490 106 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.132-201ENST00000363421 102 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.146-201ENST00000363549 102 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.179-201ENST00000363844 90 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.358-201ENST00000365491 99 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 Y_RNA.463-201ENST00000384271 102 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR625-201ENST00000385047 85 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MRPS18CP6-201ENST00000423587 223 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MIR2053-201ENST00000459295 91 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RNU7-87P-201ENST00000459343 62 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC093023.1-201ENST00000547375 507 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AK6P2-201ENST00000549020 471 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC078899.2-201ENST00000595282 212 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 MZT1P2-201ENST00000604387 248 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC010999.1-201ENST00000611856 324 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC130454.1-201ENST00000622948 401 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 AC091925.1-201ENST00000623204 462 ntBASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.78□□□□□ -2.12
TRBV4-1A0A0J9YWV2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
TRBV4-1A0A0J9YWV2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRBV4-1A0A0J9YWV2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC073544.1-201ENST00000600110 1595 ntBASIC1.77□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.61-201ENST00000362835 102 ntBASIC1.77□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-1305P-201ENST00000364353 104 ntBASIC1.77□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.315-201ENST00000365117 102 ntBASIC1.77□□□□□ -2.13
TRBV4-1A0A0J9YWV2 MIR329-1-201ENST00000385028 80 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms