Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 Y_RNA.404-201ENST00000383978 102 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-331P-201ENST00000384724 107 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-997P-201ENST00000384725 107 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 RNA5SP504-201ENST00000410676 117 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 SRIP3-201ENST00000413200 219 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 MTCO3P46-201ENST00000425787 232 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC092473.1-201ENST00000441098 221 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 OR2AQ1P-201ENST00000451972 200 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC023790.1-201ENST00000482174 347 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC103851.1-201ENST00000506833 274 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AK6P2-201ENST00000549020 471 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 MIR5696-201ENST00000578474 85 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 MIR4781-201ENST00000585250 76 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC011712.1-201ENST00000588959 234 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC007229.1-201ENST00000590455 412 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 uc_338.5-201ENST00000611839 155 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 AC122108.2-201ENST00000611946 526 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 SCARNA4-201ENST00000629045 128 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 ZNF204P-201ENST00000416749 2397 ntBASIC1.21□□□□□ -2.22
TRAV40A0A0B4J280 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 MIR337-201ENST00000362281 93 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-874P-201ENST00000362390 105 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 RNU1-58P-201ENST00000362413 163 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-222P-201ENST00000362438 107 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.88-201ENST00000363029 99 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 RNU4-13P-201ENST00000364019 141 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 RNU4-56P-201ENST00000364700 142 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 SNORD81.2-201ENST00000365153 76 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.594-201ENST00000410373 140 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC243428.1-201ENST00000421099 264 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 MTCO1P44-201ENST00000441935 243 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 PMCHL2-203ENST00000457791 237 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 MIR4529-201ENST00000578110 78 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 MIR5006-201ENST00000583027 110 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC005014.2-201ENST00000607795 599 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AL157834.3-201ENST00000615543 103 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC005562.2-201ENST00000618264 111 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 MTND5P9-201ENST00000503854 1755 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 AP000648.3-201ENST00000623539 4507 ntBASIC1.2□□□□□ -2.22
TRAV40A0A0B4J280 LINC02555-201ENST00000563933 1951 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-845P-201ENST00000362578 103 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.99-201ENST00000363138 105 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-23P-201ENST00000363283 107 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.405-201ENST00000383979 100 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-767P-201ENST00000384132 107 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.451-201ENST00000384200 100 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.524-201ENST00000384564 100 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.561-201ENST00000384694 100 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC123900.1-201ENST00000420390 96 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 EIF4EP2-201ENST00000422816 654 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC099677.2-201ENST00000436385 175 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 DAP3P1-201ENST00000441522 278 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 MTND3P10-201ENST00000450967 341 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 SNORD5.1-201ENST00000458800 75 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 U8.22-201ENST00000459141 133 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 RPS23P5-201ENST00000495419 428 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC005840.1-201ENST00000498412 377 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 HMGN1P12-201ENST00000499125 195 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 TRMT112P2-201ENST00000512910 132 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-58P-201ENST00000517143 103 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC027288.2-201ENST00000553028 243 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC018462.2-201ENST00000605375 395 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC009229.3-201ENST00000608056 282 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 SDR42E1P4-201ENST00000620894 481 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 AC099654.5-201ENST00000636479 350 ntBASIC1.19□□□□□ -2.22
TRAV40A0A0B4J280 RNY1P10-201ENST00000363268 113 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-727P-201ENST00000363592 107 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 SNORD87-201ENST00000364849 89 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 SNORD31B-201ENST00000364977 69 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-1013P-201ENST00000384180 107 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 SNORA67.2-201ENST00000384300 149 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms