Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 Y_RNA.424-201ENST00000384063 103 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-281P-201ENST00000384212 103 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 AL590004.1-201ENST00000405321 300 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 MTCO3P19-201ENST00000415864 321 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 AC096638.1-201ENST00000444678 216 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 CHEK2P4-201ENST00000450340 246 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-667P-201ENST00000517186 102 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 AC010999.1-201ENST00000611856 324 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 AL365361.1-201ENST00000566942 3481 ntBASIC2.36□□□□□ -2.03
CLDN16Q9Y5I7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 Y_RNA.148-201ENST00000363557 117 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-727P-201ENST00000363592 107 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 SNORA25B-201ENST00000365507 128 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-438P-201ENST00000365561 103 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 MIR592-201ENST00000384959 97 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AL033519.2-201ENST00000403958 392 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 EIF1P2-201ENST00000428233 350 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 IFNA11P-201ENST00000446352 526 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 UBE2DNL-203ENST00000474922 222 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 RNU1-117P-201ENST00000517041 158 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 DEFB131C-201ENST00000528817 165 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 MYL12BP1-201ENST00000569826 507 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AC040896.1-201ENST00000613819 479 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AC138305.3-201ENST00000624988 240 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 MIR1248-201ENST00000629190 106 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AC005592.1-201ENST00000566527 1640 ntBASIC2.35□□□□□ -2.03
CLDN16Q9Y5I7 AC091812.1-201ENST00000432235 1948 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 MTND4P1-201ENST00000457501 1466 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 Z82195.2-201ENST00000612348 18351 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-793P-201ENST00000384233 104 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 AL357139.1-201ENST00000407792 426 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 RNU6-1001P-201ENST00000411265 100 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 AC010095.1-201ENST00000443543 144 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 RNA5SP490-201ENST00000517141 136 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 MIR5092-201ENST00000583139 88 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 MIR5188-201ENST00000583467 113 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 RPS29P30-201ENST00000600975 111 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 SNORD58B-201ENST00000607313 66 ntBASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN16Q9Y5I7 ZNF658B-202ENST00000615961 3375 ntBASIC2.34□□□□□ -2.04
CLDN16Q9Y5I7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CLDN16Q9Y5I7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.34□□□□□ -2.04
CLDN16Q9Y5I7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 RNA5SP361-201ENST00000362686 118 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 MRPL42P3-201ENST00000401492 326 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 AC009237.7-201ENST00000447357 229 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 SNORA4.4-201ENST00000515921 135 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-991P-201ENST00000516168 107 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 AL442163.3-201ENST00000554110 156 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 AC125232.2-201ENST00000592457 143 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 AL353621.2-201ENST00000605340 133 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 AC025754.2-201ENST00000606491 432 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 AC012640.5-201ENST00000623897 319 ntBASIC2.33□□□□□ -2.04
CLDN16Q9Y5I7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 MTND5P35-201ENST00000557537 1720 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 RNU1-62P-201ENST00000362599 164 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 RNU1-76P-201ENST00000362903 159 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 SNORA33.2-201ENST00000365413 134 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 SNORD14.1-201ENST00000365609 90 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 AC117470.1-201ENST00000381974 330 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-639P-201ENST00000384074 107 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-926P-201ENST00000384075 107 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-611P-201ENST00000384276 104 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 SNORA51.11-201ENST00000384442 131 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 HMGN2P18-201ENST00000450680 270 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 AC091179.3-201ENST00000474761 144 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.32□□□□□ -2.04
CLDN16Q9Y5I7 RNU6-911P-201ENST00000516523 104 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms