Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 U6.104-201ENST00000637979 90 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AL031121.1-201ENST00000406553 254 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 MIR1302-6-201ENST00000408466 90 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AC004866.1-201ENST00000411748 78 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AL161788.1-201ENST00000441805 169 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 RPS23P5-201ENST00000495419 428 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AK6P2-201ENST00000549020 471 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 MIR4423-201ENST00000580922 80 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 MIR4300-201ENST00000581016 96 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AL356280.1-201ENST00000603614 379 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 SNORD11B-201ENST00000607707 90 ntBASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA13Q9Y5I0 MIR410-201ENST00000362222 80 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-626P-201ENST00000363354 107 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-944P-201ENST00000364023 107 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 RNA5SP210-201ENST00000391034 120 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA26.7-201ENST00000391288 122 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 FO393413.1-201ENST00000402892 195 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 ELOCP21-201ENST00000412558 336 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 AL390729.2-201ENST00000416137 156 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 AC005002.2-201ENST00000438228 269 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-408P-201ENST00000515910 100 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.668-201ENST00000516233 93 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 AC018448.1-201ENST00000552843 316 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 MIR3670-2-201ENST00000582974 65 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 MIR3670-1-201ENST00000584160 65 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 MIR3670-3-201ENST00000584855 65 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 MIR3670-4-201ENST00000612260 65 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 MIR376A1-201ENST00000616574 68 ntBASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHA13Q9Y5I0 AL365361.1-201ENST00000566942 3481 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 AC009487.2-201ENST00000420969 6821 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-961P-201ENST00000363893 105 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-472P-201ENST00000384299 107 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA67.2-201ENST00000384300 149 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.518-201ENST00000384552 113 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-220P-201ENST00000390919 107 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 AC104332.2-201ENST00000429959 156 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 UQCRBP2-201ENST00000447827 297 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 RRN3P3-201ENST00000549207 578 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 MIR4635-201ENST00000583759 79 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 AC068205.3-201ENST00000636385 468 ntBASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA13Q9Y5I0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 RNU1-112P-201ENST00000364401 164 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-20P-201ENST00000384106 107 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-937P-201ENST00000384325 106 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 MT-TG-201ENST00000387429 68 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 AL138827.1-201ENST00000402666 306 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 AL033519.2-201ENST00000403958 392 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 AC003685.2-201ENST00000422795 395 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 SRIP1-201ENST00000489235 288 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 RNA5SP341-201ENST00000516261 117 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 RN7SKP282-201ENST00000516824 299 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA48.11-201ENST00000517015 89 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 AL449363.1-201ENST00000617815 186 ntBASIC2.84□□□□□ -1.95
PCDHA13Q9Y5I0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.84□□□□□ -1.96
PCDHA13Q9Y5I0 AC080100.1-201ENST00000624239 5356 ntBASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 Y_RNA.461-201ENST00000384263 103 ntBASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 MT-TW-201ENST00000387382 68 ntBASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 RNU2-63P-201ENST00000410792 194 ntBASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 Y_RNA.618-201ENST00000410949 107 ntBASIC2.83□□□□□ -1.96
PCDHA13Q9Y5I0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms