Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 OOSP1P1-201ENST00000423265 274 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AC027124.2-201ENST00000428249 105 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AL445305.1-201ENST00000432577 575 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AC244505.4-201ENST00000434905 287 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 SSXP5-201ENST00000443473 287 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 MTND4LP30-201ENST00000454092 297 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 TRBVB-201ENST00000477100 408 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AC025465.3-201ENST00000510570 311 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AC023824.2-201ENST00000566185 400 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AL109918.3-201ENST00000603072 338 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 MIR6715A-201ENST00000615929 79 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AP001282.2-201ENST00000616149 309 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AC096644.4-201ENST00000563417 2912 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PCDHB1Q9Y5F3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 RNU4-82P-201ENST00000362443 140 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 RNU1-72P-201ENST00000362976 153 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 RNA5SP240-201ENST00000365355 128 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 MIR1294-201ENST00000408503 142 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AC009310.1-201ENST00000414414 451 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AL139281.1-201ENST00000422120 335 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AC004386.2-201ENST00000441858 148 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AC010095.1-201ENST00000443543 144 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AP004217.1-201ENST00000480579 346 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 CKS1BP2-201ENST00000497342 240 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AC074133.1-201ENST00000515696 183 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-344P-201ENST00000516635 111 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 RNU2-44P-201ENST00000516795 194 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AL713866.2-201ENST00000603579 219 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 MTND5P35-201ENST00000557537 1720 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
PCDHB1Q9Y5F3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 Z82209.1-201ENST00000422141 2135 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 AC062016.1-201ENST00000355719 319 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 RNU2-25P-201ENST00000411041 191 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 BMS1P22-201ENST00000414726 313 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 AC083906.5-201ENST00000503722 328 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 MIR5006-201ENST00000583027 110 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 AC104984.5-201ENST00000586878 94 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 U6.104-201ENST00000637979 90 ntBASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHB1Q9Y5F3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 SNORA18.2-201ENST00000383865 132 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-926P-201ENST00000384075 107 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 MIR549A-201ENST00000385268 96 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AL079342.1-201ENST00000401460 267 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-1203P-201ENST00000410703 110 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNU2-63P-201ENST00000410792 194 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNA5SP184-201ENST00000411071 108 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AL451074.5-201ENST00000415894 435 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AL161788.1-201ENST00000441805 169 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AC009237.7-201ENST00000447357 229 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RPL39P38-201ENST00000467018 153 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RPS23P5-201ENST00000495419 428 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 RNU6-111P-201ENST00000517179 105 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 MIR4300-201ENST00000581016 96 ntBASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHB1Q9Y5F3 MIR4506-201ENST00000584693 77 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms