Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 AC026241.1-201ENST00000517873 2142 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 MIR335-201ENST00000362173 94 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 RNU6-626P-201ENST00000363354 107 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 U3.9-201ENST00000363823 204 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 Y_RNA.257-201ENST00000364596 102 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 SNORA20.1-201ENST00000364790 130 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 RNU6-20P-201ENST00000384106 107 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 SNORA46.1-201ENST00000391069 153 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 AL512633.1-201ENST00000399931 655 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 AC007395.1-201ENST00000451333 677 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 AC107222.1-201ENST00000510899 637 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 RRN3P3-201ENST00000549207 578 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 MIR6733-201ENST00000635723 61 ntBASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHB6Q9Y5E3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 AC069528.2-201ENST00000624849 1991 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 RNU4-90P-201ENST00000362773 141 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 Y_RNA.552-201ENST00000384665 112 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 MIR548H3-201ENST00000408771 118 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 RNU5A-5P-201ENST00000411054 116 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 EIF4EP4-201ENST00000424916 578 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 AC087499.2-201ENST00000432861 149 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 UQCRBP2-201ENST00000447827 297 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 HSPE1P25-201ENST00000455484 251 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 RPS23P5-201ENST00000495419 428 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 RNA5SP112-201ENST00000515937 99 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 RN7SKP132-201ENST00000516001 208 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 AC103810.1-201ENST00000579873 453 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 MIR4423-201ENST00000580922 80 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 AL033523.1-201ENST00000605153 153 ntBASIC3.09□□□□□ -1.91
PCDHB6Q9Y5E3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.09□□□□□ -1.92
PCDHB6Q9Y5E3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.09□□□□□ -1.92
PCDHB6Q9Y5E3 AC099654.7-201ENST00000635788 2127 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-727P-201ENST00000363592 107 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-290P-201ENST00000365212 101 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.478-201ENST00000384358 107 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 RNU4-30P-201ENST00000410245 143 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC027124.2-201ENST00000428249 105 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 IFNA11P-201ENST00000446352 526 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 UBE2DNL-203ENST00000474922 222 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 RNU7-110P-201ENST00000516891 62 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 CYCSP23-201ENST00000519781 313 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AK6P2-201ENST00000549020 471 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC027176.1-201ENST00000560204 514 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC026470.2-201ENST00000561492 181 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AL670379.2-201ENST00000604983 252 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 SNORD113-5-201ENST00000607261 78 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC011373.1-201ENST00000607270 237 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 AC005562.2-201ENST00000618264 111 ntBASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB6Q9Y5E3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 RNU1-62P-201ENST00000362599 164 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 SNORD27-201ENST00000363981 72 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.286-201ENST00000364813 102 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.416-201ENST00000384014 113 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-21P-201ENST00000384710 107 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-625P-201ENST00000459412 107 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 RPL31P41-201ENST00000477967 372 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 SEPT14P8-201ENST00000508026 178 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 AC074133.1-201ENST00000515696 183 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 SCARNA24.2-201ENST00000516968 130 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 AC233702.2-202ENST00000562547 291 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 AC005176.2-201ENST00000596933 147 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 RPL30P11-203ENST00000598995 310 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 AC010900.2-201ENST00000604508 210 ntBASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-486P-201ENST00000363116 107 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 SNORA18.2-201ENST00000383865 132 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 SNORA12-201ENST00000391162 147 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 MIR1289-1-201ENST00000408836 144 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 RNA5SP21-201ENST00000410917 96 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms