Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AL139247.1-201ENST00000422768 325 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AL121890.1-201ENST00000435457 205 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 TMSB4XP3-201ENST00000445144 114 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AL357552.1-201ENST00000445254 415 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 SCARNA3-201ENST00000517097 143 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AC027419.1-201ENST00000522976 328 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 RN7SL703P-201ENST00000578485 302 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AC069294.1-201ENST00000608397 350 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 MIR8058-201ENST00000615737 89 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 snoZ196.1-201ENST00000625269 89 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SF3B6Q9Y3B4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.15□□□□□ -1.9
SF3B6Q9Y3B4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SF3B6Q9Y3B4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SF3B6Q9Y3B4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 Y_RNA.24-201ENST00000362508 103 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 Y_RNA.75-201ENST00000362927 97 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 SNORA73.2-201ENST00000364946 201 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 SNORA8.3-201ENST00000384679 139 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 MIR554-201ENST00000384874 96 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 MIR626-201ENST00000385032 94 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AL355497.1-201ENST00000406262 551 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AL606753.1-201ENST00000427435 87 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AC017083.1-201ENST00000428093 483 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 MICF-203ENST00000432679 129 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AC074290.1-201ENST00000448883 135 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AC114982.1-201ENST00000469402 321 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 RPL27AP5-201ENST00000469428 449 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 Y_RNA.797-201ENST00000515977 94 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AC105245.1-201ENST00000581934 244 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 MIR1248-201ENST00000629190 106 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.15□□□□□ -1.91
SF3B6Q9Y3B4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 Y_RNA.23-201ENST00000362496 106 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-312P-201ENST00000364629 107 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 SNORD31B-201ENST00000364977 69 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RNA5SP240-201ENST00000365355 128 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-418P-201ENST00000384035 107 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-975P-201ENST00000384296 105 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 MIR613-201ENST00000385248 95 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 MIR873-201ENST00000401120 77 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RN7SKP156-201ENST00000410308 342 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 HSPE1P21-201ENST00000438283 308 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RPL23AP7-203ENST00000449021 469 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 SNORD65B-201ENST00000459126 73 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RPS29P12-201ENST00000460178 152 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 RPS27P29-201ENST00000463110 252 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 MIR3684-201ENST00000579779 74 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SF3B6Q9Y3B4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-704P-201ENST00000364162 103 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-969P-201ENST00000383900 105 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 U6atac.2-201ENST00000408644 118 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 AC126124.2-201ENST00000413542 321 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-221P-201ENST00000459541 99 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 RN7SL594P-201ENST00000470590 287 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 SEM1P1-201ENST00000506694 209 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 RN7SKP164-201ENST00000516138 266 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 AC018630.3-201ENST00000542637 96 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 MIR7157-201ENST00000635801 60 ntBASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
SF3B6Q9Y3B4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
SF3B6Q9Y3B4 SNORA27.1-201ENST00000362604 124 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms