Protein–RNA interactions for Protein: Q9Y2J2

EPB41L3, Band 4.1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,087 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3Q9Y2J2 RNU6-966P-201ENST00000516479 104 ntBASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 RN7SKP40-201ENST00000517211 242 ntBASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 U4atac.1-201ENST00000618345 95 ntBASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 snoZ196.1-201ENST00000625269 89 ntBASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EPB41L3Q9Y2J2 Y_RNA.243-201ENST00000364481 109 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6-1248P-201ENST00000391096 64 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RN7SKP58-201ENST00000411010 305 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 AC104389.3-201ENST00000445629 235 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RNU2-34P-201ENST00000516534 121 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6-56P-201ENST00000516986 93 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 AL512605.2-201ENST00000592972 256 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 AC010900.2-201ENST00000604508 210 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 U1.23-201ENST00000610293 146 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 RNU1-68P-201ENST00000615382 146 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 AC141273.2-201ENST00000618989 130 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 U1.39-201ENST00000621562 146 ntBASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
EPB41L3Q9Y2J2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 Y_RNA.277-201ENST00000364754 102 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 Y_RNA.418-201ENST00000384029 102 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 Y_RNA.515-201ENST00000384535 112 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 AL139095.1-201ENST00000404326 391 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 RNU2-48P-201ENST00000410694 191 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 MTCO1P5-201ENST00000433573 344 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6-667P-201ENST00000517186 102 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 MIR4286-201ENST00000580651 93 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 MIR3158-1-201ENST00000583596 81 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 AC078938.1-201ENST00000620993 318 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 AC034229.5-201ENST00000624258 185 ntBASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
EPB41L3Q9Y2J2 SNORA25B-201ENST00000365507 128 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 AC009238.1-201ENST00000442165 424 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 AC009237.6-201ENST00000446969 424 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 SNORD105B-201ENST00000458770 79 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6-498P-201ENST00000459468 107 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 AC093259.1-201ENST00000509755 300 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6-991P-201ENST00000516168 107 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 RNU6-436P-201ENST00000516171 114 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 SNORA67.7-201ENST00000516664 135 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 U6.115-201ENST00000636045 103 ntBASIC3.34□□□□□ -1.87
EPB41L3Q9Y2J2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 SNORD115-30-201ENST00000364117 82 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 Y_RNA.329-201ENST00000365209 107 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 AL031121.1-201ENST00000406553 254 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 RNU6-57P-201ENST00000411348 103 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 AC123900.1-201ENST00000420390 96 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 AC016717.1-201ENST00000448918 286 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 RNU6-221P-201ENST00000459541 99 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 AC018868.1-201ENST00000491307 315 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 AC091959.1-201ENST00000495857 238 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 SNORA27.4-201ENST00000516650 95 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 RNU6-111P-201ENST00000517179 105 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 PRELID2P1-201ENST00000552837 301 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 DEFB117-201ENST00000602356 141 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.33□□□□□ -1.88
EPB41L3Q9Y2J2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 RNA5SP124-201ENST00000362739 110 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 SNORD56.5-201ENST00000364281 72 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 Y_RNA.332-201ENST00000365271 113 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 RNU6-418P-201ENST00000384035 107 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 AL031003.1-201ENST00000404229 172 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 RNA5SP344-201ENST00000411081 104 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 AC025754.2-201ENST00000606491 432 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
EPB41L3Q9Y2J2 AC013412.1-201ENST00000610687 192 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms