Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AC009237.7-201ENST00000447357 229 ntBASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 SNORA81.3-201ENST00000517283 198 ntBASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 AC007318.2-201ENST00000620999 243 ntBASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 AC091932.3-201ENST00000624223 323 ntBASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 AC090517.3-201ENST00000625170 141 ntBASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
ZNRF3Q9ULT6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 PWAR6-201ENST00000552334 4618 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.29-201ENST00000362570 113 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 RNU4-70P-201ENST00000384579 139 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 RNA5SP508-201ENST00000411327 119 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 PIGPP3-201ENST00000425307 415 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AL138752.1-201ENST00000452964 351 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 SNORD109B-201ENST00000458961 67 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 SNORD109A-201ENST00000459128 67 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AC091959.1-201ENST00000495857 238 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 RAC1P5-201ENST00000512182 576 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 RNU6-155P-201ENST00000516347 100 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.679-201ENST00000516416 91 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 RNU1-117P-201ENST00000517041 158 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AC055872.1-201ENST00000570978 278 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AL512605.2-201ENST00000592972 256 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AL109918.3-201ENST00000603072 338 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 AC006380.1-201ENST00000603598 186 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNRF3Q9ULT6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.83-201ENST00000363005 113 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.136-201ENST00000363444 102 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.274-201ENST00000364714 101 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 CD24P4-201ENST00000382840 243 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 RNU6-1264P-201ENST00000383891 107 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.446-201ENST00000384178 104 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 MIR196B-201ENST00000384852 84 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.590-201ENST00000410140 107 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 RNU2-52P-201ENST00000410680 190 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 MTCO1P5-201ENST00000433573 344 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 AL121890.1-201ENST00000435457 205 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 RNU2-44P-201ENST00000516795 194 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 AC107294.3-201ENST00000609211 526 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 AC073476.4-201ENST00000628409 72 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 AC068205.3-201ENST00000636385 468 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 AC009487.2-201ENST00000420969 6821 ntBASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNRF3Q9ULT6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.275-201ENST00000364726 110 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 RNU6-740P-201ENST00000364734 105 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 SNORA12-201ENST00000391162 147 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 RPL19P1-201ENST00000411635 428 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 AL159169.1-201ENST00000421119 127 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 RPS12P18-201ENST00000442381 270 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 TRBV12-1-201ENST00000479785 344 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 RN7SL20P-201ENST00000488827 297 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 DEFB131C-201ENST00000528817 165 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 MIR4643-201ENST00000577473 78 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 RPL17P51-201ENST00000605218 238 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 AC002064.3-201ENST00000623448 346 ntBASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNRF3Q9ULT6 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.101-201ENST00000363154 102 ntBASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.199-201ENST00000364014 102 ntBASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 SNORA9.2-201ENST00000365361 133 ntBASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 Y_RNA.418-201ENST00000384029 102 ntBASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 MIR548I3-201ENST00000408378 149 ntBASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 MIR548I1-201ENST00000408810 149 ntBASIC3.53□□□□□ -1.84
ZNRF3Q9ULT6 RNU2-54P-201ENST00000410299 190 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms