Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Y_RNA.86-201ENST00000363020 111 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 MIR17-201ENST00000385012 84 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-329P-201ENST00000459618 107 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 RNA5SP102-201ENST00000516865 106 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 RNU1-54P-201ENST00000517181 120 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 AC011712.1-201ENST00000588959 234 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 CYP2C61P-201ENST00000604072 290 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 AC009248.2-201ENST00000619826 254 ntBASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-1164P-201ENST00000364428 107 ntBASIC3.23□□□□□ -1.89
SHROOM4Q9ULL8 SNORD31B-201ENST00000364977 69 ntBASIC3.23□□□□□ -1.89
SHROOM4Q9ULL8 RNU6-1026P-201ENST00000384465 108 ntBASIC3.23□□□□□ -1.89
SHROOM4Q9ULL8 RNA5SP450-201ENST00000411206 102 ntBASIC3.23□□□□□ -1.89
SHROOM4Q9ULL8 AL139396.1-201ENST00000421137 167 ntBASIC3.23□□□□□ -1.89
SHROOM4Q9ULL8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM4Q9ULL8 MIR6779-201ENST00000617283 64 ntBASIC3.23□□□□□ -1.89
SHROOM4Q9ULL8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 SNORD114-26-201ENST00000363543 72 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 SNORA16B-201ENST00000364674 135 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 RNA5SP212-201ENST00000391223 107 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 AL359697.1-201ENST00000624879 587 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 SNORD50.1-201ENST00000362987 71 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 EIF4EP2-201ENST00000422816 654 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 AC007215.1-201ENST00000464893 276 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 AC087477.1-201ENST00000465747 340 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 AC026470.2-201ENST00000561492 181 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 TCL6_2.1-201ENST00000615162 119 ntBASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM4Q9ULL8 MIR144-201ENST00000384886 86 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 MIR1283-2-201ENST00000408621 87 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 RNU6-1148P-201ENST00000410992 104 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 AC096920.1-201ENST00000423991 241 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 Y_RNA.682-201ENST00000516457 100 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 RNA5SP54-201ENST00000516951 92 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 AP005660.1-201ENST00000522972 293 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 AL162373.1-201ENST00000620433 407 ntBASIC3.21□□□□□ -1.9
SHROOM4Q9ULL8 LINC02555-201ENST00000563933 1951 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 SNORA18.2-201ENST00000383865 132 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 MTATP6P13-201ENST00000438531 667 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 SNRPEP8-201ENST00000442866 260 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 AC007395.1-201ENST00000451333 677 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 RPL23AP3-201ENST00000453844 468 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 MIR4452-201ENST00000583004 71 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 AL645939.4-201ENST00000604495 135 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.2□□□□□ -1.9
SHROOM4Q9ULL8 RNA5SP493-201ENST00000364115 91 ntBASIC3.19□□□□□ -1.9
SHROOM4Q9ULL8 MIR300-201ENST00000401138 83 ntBASIC3.19□□□□□ -1.9
SHROOM4Q9ULL8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.19□□□□□ -1.9
SHROOM4Q9ULL8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.19□□□□□ -1.9
SHROOM4Q9ULL8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.19□□□□□ -1.9
SHROOM4Q9ULL8 MIR6128-201ENST00000615528 109 ntBASIC3.19□□□□□ -1.9
SHROOM4Q9ULL8 AL596028.1-201ENST00000326971 197 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RNA5SP276-201ENST00000362580 94 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RNU1-76P-201ENST00000362903 159 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 SNORD114-6-201ENST00000364393 72 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RNU4-9P-201ENST00000364951 139 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RNU6-596P-201ENST00000365395 98 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RNA5SP37-201ENST00000365420 130 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 MTND3P8-201ENST00000412909 339 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 AL158823.1-201ENST00000418441 478 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RPL23AP6-201ENST00000446637 472 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RNU1-131P-201ENST00000458943 161 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 RPS27P21-201ENST00000486977 252 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 AF186996.7-201ENST00000492781 209 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 AC069439.1-201ENST00000494739 167 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 MIR4421-201ENST00000578133 69 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 MIR5006-201ENST00000583027 110 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 AC005034.5-201ENST00000604219 466 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 AC005562.2-201ENST00000618264 111 ntBASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SHROOM4Q9ULL8 MTND5P9-201ENST00000503854 1755 ntBASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 MTND2P29-201ENST00000438595 412 ntBASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 PMCHL2-203ENST00000457791 237 ntBASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 snoU13.30-201ENST00000458951 104 ntBASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 ATP5EP1-201ENST00000510257 156 ntBASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 AC016727.2-201ENST00000603988 621 ntBASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 AL773524.1-201ENST00000614065 229 ntBASIC3.17□□□□□ -1.9
SHROOM4Q9ULL8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 RNU6-23P-201ENST00000363283 107 ntBASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 MIR1323-201ENST00000408090 73 ntBASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 AC009474.2-201ENST00000451383 136 ntBASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 RNA5SP233-201ENST00000459153 113 ntBASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 AC018710.1-201ENST00000506509 158 ntBASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM4Q9ULL8 MIR5696-201ENST00000578474 85 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms