Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 AC005786.1-201ENST00000588553 154 ntBASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 CTHRC1P1-201ENST00000605383 469 ntBASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 AC104458.1-201ENST00000608243 463 ntBASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.73□□□□□ -2.13
NPC1L1Q9UHC9 Y_RNA.123-201ENST00000363338 102 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNU4-40P-201ENST00000364351 143 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNU6-968P-201ENST00000384076 107 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 SNORA29-201ENST00000384183 140 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 MIR521-1-201ENST00000384902 87 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 MIR320B2-201ENST00000408479 138 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 MTCO1P21-201ENST00000416634 589 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AC007395.1-201ENST00000451333 677 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 EIF1P4-201ENST00000572664 335 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 CPDP1-201ENST00000579660 283 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 FAM157A-202ENST00000615155 405 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 U4.5-201ENST00000617137 123 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 Y_RNA.41-201ENST00000362646 102 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNU6-562P-201ENST00000362731 107 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNU6-451P-201ENST00000362921 107 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNU1-22P-201ENST00000363334 158 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 Y_RNA.132-201ENST00000363421 102 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 SNORA48.1-201ENST00000390879 135 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 MIR300-201ENST00000401138 83 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNA5SP501-201ENST00000410990 112 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AC112492.4-201ENST00000456549 352 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 Y_RNA.665-201ENST00000516177 98 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNU6-720P-201ENST00000516363 108 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 RNU6-1098P-201ENST00000516772 96 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AC011604.1-201ENST00000545978 196 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 MIR3169-201ENST00000578032 83 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 MIR6734-201ENST00000621166 68 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AL133216.2-202ENST00000634512 349 ntBASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.72□□□□□ -2.13
NPC1L1Q9UHC9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 RNU5B-2P-201ENST00000363036 113 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 RNY4P14-201ENST00000363656 96 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 Y_RNA.256-201ENST00000364594 104 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 RNU6-784P-201ENST00000384330 106 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AL353572.1-201ENST00000442490 417 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AL357134.1-201ENST00000445848 426 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 HMGN2P26-201ENST00000463169 339 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 RNA5SP480-201ENST00000516840 109 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 MTND1P5-201ENST00000517906 940 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AF250324.2-201ENST00000608299 610 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AL133215.3-201ENST00000609801 448 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 AL590240.4-201ENST00000616908 390 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.71□□□□□ -2.14
NPC1L1Q9UHC9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 Y_RNA.38-201ENST00000362617 102 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 RNY1-201ENST00000364228 113 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 AC009161.1-201ENST00000417306 376 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 HSPE1P21-201ENST00000438283 308 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 SNRPEP8-201ENST00000442866 260 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 AC016925.1-201ENST00000458303 298 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 RPS29P23-201ENST00000458635 123 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 MTND1P35-201ENST00000526739 508 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 AC146944.4-201ENST00000602697 718 ntBASIC1.7□□□□□ -2.14
NPC1L1Q9UHC9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 Y_RNA.318-201ENST00000365131 97 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 RNU6-790P-201ENST00000384479 105 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 RNA5SP118-201ENST00000410385 109 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 Y_RNA.615-201ENST00000410769 117 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 AC009310.1-201ENST00000414414 451 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 NCOR1P3-201ENST00000420479 303 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 USP9YP28-201ENST00000435142 589 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 MTND1P34-201ENST00000438556 671 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 PCMTD1P1-201ENST00000455560 355 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 SNORA44.1-201ENST00000517031 108 ntBASIC1.69□□□□□ -2.14
NPC1L1Q9UHC9 SUMO2P18-201ENST00000518873 252 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms