Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.34□□□□□ -2.19
CLCF1Q9UBD9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.151-201ENST00000363566 112 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.318-201ENST00000365131 97 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 RNU6-877P-201ENST00000383868 107 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 RNU6-95P-201ENST00000384697 107 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.573-201ENST00000384763 105 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 FGF7P8-201ENST00000402994 292 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AF186996.7-201ENST00000492781 209 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AC008834.1-201ENST00000511612 175 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AC067942.3-201ENST00000512025 362 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 RNU2-34P-201ENST00000516534 121 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 SUB1P3-201ENST00000564581 315 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 uc_338.5-201ENST00000611839 155 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 AC024614.3-201ENST00000637860 256 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 MTND4P5-201ENST00000435821 1374 ntBASIC1.33□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.414-201ENST00000384011 101 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 MIR30A-201ENST00000385092 71 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 DAP3P1-201ENST00000441522 278 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 AC009237.7-201ENST00000447357 229 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 MTND1P11-201ENST00000456661 876 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 RNU7-66P-201ENST00000459469 62 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 AC114982.1-201ENST00000469402 321 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 AC010409.1-201ENST00000487382 476 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 RPL23AP75-201ENST00000491601 451 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 SNORA31.17-201ENST00000516953 127 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 RNU6-856P-201ENST00000516959 98 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 MTND1P5-201ENST00000517906 940 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 TPRKBP2-201ENST00000565969 475 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 MIR3198-2-201ENST00000577868 80 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 POLR3GP2-201ENST00000588366 668 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 U4.5-201ENST00000617137 123 ntBASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLCF1Q9UBD9 SNORD50.1-201ENST00000362987 71 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 RNU6-112P-201ENST00000363599 104 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 RNU6-418P-201ENST00000384035 107 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.450-201ENST00000384198 113 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.554-201ENST00000384672 102 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 RPL21P111-201ENST00000418453 477 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 HSPE1P21-201ENST00000438283 308 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 MTCO3P8-201ENST00000453691 755 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 MTCO2P30-201ENST00000503662 364 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AC091435.1-201ENST00000505442 584 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 ACA59.1-201ENST00000515966 143 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 RNU6-948P-201ENST00000516374 107 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 RRN3P3-201ENST00000549207 578 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 MIR3672-201ENST00000584290 82 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AC069114.2-201ENST00000604699 304 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 AC009033.1-201ENST00000624279 431 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 SCARNA4-201ENST00000629045 128 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 WWP1P1-201ENST00000466609 2769 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 BX322639.1-202ENST00000423987 2213 ntBASIC1.31□□□□□ -2.2
CLCF1Q9UBD9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.3-201ENST00000362331 103 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.135-201ENST00000363439 95 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 RNU4-12P-201ENST00000365233 139 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 SNORD116-4-201ENST00000384733 96 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 MIR517A-201ENST00000385001 87 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 RNA5SP118-201ENST00000410385 109 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 AC009161.1-201ENST00000417306 376 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 AL590632.1-201ENST00000424289 371 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 AL589823.1-201ENST00000429577 183 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 NFU1P2-201ENST00000448700 469 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 AC074290.1-201ENST00000448883 135 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 RNU6-1198P-201ENST00000516904 67 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 RNA5SP54-201ENST00000516951 92 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
CLCF1Q9UBD9 RNU6-862P-201ENST00000362804 105 ntBASIC1.29□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.89-201ENST00000363031 102 ntBASIC1.29□□□□□ -2.2
CLCF1Q9UBD9 Y_RNA.212-201ENST00000364177 102 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms