Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 Y_RNA.431-201ENST00000384086 102 ntBASIC3.34□□□□□ -1.87
USP35Q9P2H5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP35Q9P2H5 AC090617.3-201ENST00000573670 475 ntBASIC3.34□□□□□ -1.87
USP35Q9P2H5 AC022202.1-201ENST00000613515 211 ntBASIC3.34□□□□□ -1.87
USP35Q9P2H5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP35Q9P2H5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USP35Q9P2H5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
USP35Q9P2H5 AP006437.1-201ENST00000641440 3685 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 Y_RNA.58-201ENST00000362807 102 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 Y_RNA.154-201ENST00000363624 102 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 RNU6-873P-201ENST00000363833 107 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 RNY3P1-201ENST00000365085 102 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 RNY3-201ENST00000365484 102 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 Y_RNA.509-201ENST00000384506 99 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 MIR10B-201ENST00000385011 110 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 HMGN2P39-201ENST00000398005 273 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 RNA5SP247-201ENST00000411181 105 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 AL356320.1-201ENST00000429616 163 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 UBE2V1P7-201ENST00000446395 340 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 AC011753.1-201ENST00000451001 220 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 SNORA25.14-201ENST00000516481 132 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 RNA5SP281-201ENST00000516504 135 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 AC080078.3-201ENST00000605407 463 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 AC046143.2-201ENST00000609789 160 ntBASIC3.33□□□□□ -1.88
USP35Q9P2H5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
USP35Q9P2H5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP35Q9P2H5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP35Q9P2H5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.32□□□□□ -1.88
USP35Q9P2H5 SNORD114-1-201ENST00000362705 72 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 Y_RNA.146-201ENST00000363549 102 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 RNU6-99P-201ENST00000364721 107 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 MIR625-201ENST00000385047 85 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 RNA5SP213-201ENST00000391031 106 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 AC092423.1-201ENST00000430165 186 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 AC096638.1-201ENST00000444678 216 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 AC007395.1-201ENST00000451333 677 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 RNU7-4P-201ENST00000516961 62 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 SNORA31.25-201ENST00000517242 134 ntBASIC3.32□□□□□ -1.88
USP35Q9P2H5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.32□□□□□ -1.88
USP35Q9P2H5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.32□□□□□ -1.88
USP35Q9P2H5 MTND5P16-201ENST00000460269 1703 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 MIR586-201ENST00000385035 97 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 MIR549A-201ENST00000385268 96 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 MIR1283-1-201ENST00000408494 87 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 AC004866.1-201ENST00000411748 78 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.31□□□□□ -1.88
USP35Q9P2H5 AC099799.1-201ENST00000439809 192 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 RNU7-193P-201ENST00000516723 65 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 MIR2355-201ENST00000517199 87 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 AC021269.2-201ENST00000532318 330 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USP35Q9P2H5 AL353997.5-201ENST00000618886 171 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 AC008873.1-201ENST00000625051 138 ntBASIC3.31□□□□□ -1.88
USP35Q9P2H5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP35Q9P2H5 AC073544.1-201ENST00000600110 1595 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 RNU6-874P-201ENST00000362390 105 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 RNU6-160P-201ENST00000384591 107 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 MIR559-201ENST00000385188 96 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 AL359511.1-201ENST00000402970 211 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 RNU6-1156P-201ENST00000410365 100 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 WARS2P1-201ENST00000429678 537 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 RPS12P2-201ENST00000439728 269 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 AC114982.1-201ENST00000469402 321 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.3□□□□□ -1.88
USP35Q9P2H5 RRN3P3-201ENST00000549207 578 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 UBL5P4-201ENST00000562584 236 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 MIR1273D-201ENST00000577266 86 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 AL133255.1-201ENST00000606374 441 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 SNORD11B-201ENST00000607707 90 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.3□□□□□ -1.88
USP35Q9P2H5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.3□□□□□ -1.88
USP35Q9P2H5 AL137847.3-201ENST00000611521 109 ntBASIC3.3□□□□□ -1.88
USP35Q9P2H5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
USP35Q9P2H5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.3□□□□□ -1.88
USP35Q9P2H5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.29□□□□□ -1.88
USP35Q9P2H5 Y_RNA.61-201ENST00000362835 102 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 SNORA80E-201ENST00000384744 137 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.29□□□□□ -1.88
USP35Q9P2H5 EIF1P2-201ENST00000428233 350 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 RNU1-131P-201ENST00000458943 161 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 HMGB3P3-201ENST00000510526 400 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 RNU2-34P-201ENST00000516534 121 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 AC007336.1-201ENST00000576365 3828 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 MIR4529-201ENST00000578110 78 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 MIR4753-201ENST00000585119 83 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 AC078899.2-201ENST00000595282 212 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 AC009487.4-201ENST00000624969 3585 ntBASIC3.29□□□□□ -1.88
USP35Q9P2H5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP35Q9P2H5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
USP35Q9P2H5 Y_RNA.132-201ENST00000363421 102 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 RNU6-281P-201ENST00000384212 103 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 RNU6-793P-201ENST00000384233 104 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 SNORA67.2-201ENST00000384300 149 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 MIR518A2-201ENST00000384966 87 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USP35Q9P2H5 AL079342.1-201ENST00000401460 267 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 SNORD23.1-201ENST00000408212 104 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.28□□□□□ -1.88
USP35Q9P2H5 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms