Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC087441.2-201ENST00000529141 262 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.5□□□□□ -2.01
LRFN1Q9P244 UBL5P4-201ENST00000562584 236 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 AC090617.3-201ENST00000573670 475 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 AC005034.5-201ENST00000604219 466 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 MIR1244-1-201ENST00000612829 85 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 MIR1244-3-201ENST00000635744 85 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 MIR1244-2-201ENST00000636449 85 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 MIR1244-4-202ENST00000636813 85 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 MTND5P16-201ENST00000460269 1703 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRFN1Q9P244 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
LRFN1Q9P244 RNU6-222P-201ENST00000362438 107 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 RNU1-62P-201ENST00000362599 164 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 RNU6-1026P-201ENST00000384465 108 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 MIR29C-201ENST00000385231 88 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 SNORA40.19-201ENST00000390846 128 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 snosnR66.1-201ENST00000391095 99 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC123900.1-201ENST00000420390 96 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 EIF1P2-201ENST00000428233 350 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 WARS2P1-201ENST00000429678 537 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC096638.1-201ENST00000444678 216 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC003982.1-202ENST00000469928 248 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC096725.1-201ENST00000514266 313 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 SNORA25.14-201ENST00000516481 132 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC009127.3-201ENST00000570531 403 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC006504.6-201ENST00000590142 199 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AC092447.9-201ENST00000603395 144 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 AL360085.1-201ENST00000604713 532 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 PART1_1.1-201ENST00000611761 217 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 MTND4P1-201ENST00000457501 1466 ntBASIC2.49□□□□□ -2.01
LRFN1Q9P244 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LRFN1Q9P244 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LRFN1Q9P244 SNORA63C-201ENST00000364578 129 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 Y_RNA.314-201ENST00000365114 102 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 MIR181A2-201ENST00000384863 110 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 SNORA69.1-201ENST00000390904 137 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 HMGN2P39-201ENST00000398005 273 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 AL451074.5-201ENST00000415894 435 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.48□□□□□ -2.01
LRFN1Q9P244 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.48□□□□□ -2.01
LRFN1Q9P244 SNORA25.10-201ENST00000515926 124 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 RNU6-327P-201ENST00000516270 127 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 AC087588.2-201ENST00000617667 426 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 AC008873.1-201ENST00000625051 138 ntBASIC2.48□□□□□ -2.01
LRFN1Q9P244 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
LRFN1Q9P244 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LRFN1Q9P244 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LRFN1Q9P244 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
LRFN1Q9P244 Y_RNA.80-201ENST00000362996 102 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 RNU1-115P-201ENST00000365329 160 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 RNU6-438P-201ENST00000365561 103 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 RNU6-639P-201ENST00000384074 107 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 RNU6-281P-201ENST00000384212 103 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 SNORA67.2-201ENST00000384300 149 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 Y_RNA.485-201ENST00000384395 102 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 RNU6-738P-201ENST00000384531 106 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 RNU6-1160P-201ENST00000384546 104 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 AL356057.3-201ENST00000402607 340 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 MIR1283-1-201ENST00000408494 87 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 Y_RNA.605-201ENST00000410577 105 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 MTND2P23-201ENST00000422990 651 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 AL121890.1-201ENST00000435457 205 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 YWHAEP4-201ENST00000505390 198 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 SNORA9.3-201ENST00000516383 129 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 RNU6-1137P-201ENST00000517073 99 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 MIR2355-201ENST00000517199 87 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 SNORA31.25-201ENST00000517242 134 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 AC023442.1-201ENST00000531247 422 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 MIR3605-201ENST00000583214 100 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
LRFN1Q9P244 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
LRFN1Q9P244 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
LRFN1Q9P244 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LRFN1Q9P244 RNY3P11-201ENST00000364153 102 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 Y_RNA.557-201ENST00000384680 107 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 MIR586-201ENST00000385035 97 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 MIR181B1-201ENST00000385240 110 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 MRPL42P3-201ENST00000401492 326 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.46□□□□□ -2.02
LRFN1Q9P244 AC114482.1-201ENST00000418010 247 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 AL445305.1-201ENST00000432577 575 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 AC007395.1-201ENST00000451333 677 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 HMGB3P3-201ENST00000510526 400 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 RNU4-77P-201ENST00000516692 156 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 RNU7-193P-201ENST00000516723 65 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.46□□□□□ -2.02
LRFN1Q9P244 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 RRN3P3-201ENST00000549207 578 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 MIR5695-201ENST00000579717 85 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 SNORD11B-201ENST00000607707 90 ntBASIC2.46□□□□□ -2.02
LRFN1Q9P244 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms