Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 7SK.11-201ENST00000615477 250 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 7SK.13-201ENST00000622040 250 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 AC120349.3-201ENST00000624377 529 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 MTCO2P19-201ENST00000427513 598 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC027119.1-201ENST00000440877 241 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC104576.1-201ENST00000524225 88 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AL512310.8-201ENST00000550183 120 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC010615.1-201ENST00000594254 1764 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC110760.3-201ENST00000598794 467 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AP003465.2-201ENST00000602571 373 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 Z94722.1-201ENST00000604328 474 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 Z98751.3-201ENST00000604447 521 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AP001596.2-201ENST00000608410 312 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC064836.2-201ENST00000609491 462 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.41-201ENST00000362646 102 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.151-201ENST00000363566 112 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 SNORD32B-201ENST00000364460 84 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 RNU6-1286P-201ENST00000383871 107 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 RNU6-297P-201ENST00000384636 107 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 SNORA16.2-201ENST00000390991 127 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 SNX2P2-201ENST00000424553 323 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AL445305.1-201ENST00000432577 575 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 MTND4P32-201ENST00000437189 1237 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AL031667.1-201ENST00000440222 725 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 USP9YP12-201ENST00000450481 570 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 OR2AQ1P-201ENST00000451972 200 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 TPTE2P5-203ENST00000458118 728 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 SNRPGP7-201ENST00000469016 106 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 SNORA14.1-201ENST00000516113 141 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 LRRC34P1-201ENST00000542742 915 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 CYP3A52P-201ENST00000563326 91 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC087683.1-201ENST00000591187 441 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC068790.6-201ENST00000602558 258 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 CTHRC1P1-201ENST00000605383 469 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC091304.9-201ENST00000612091 226 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AC068137.4-201ENST00000638485 296 ntBASIC0.64□□□□□ -2.31
CCDC88CQ9P219 AL391516.1-201ENST00000554380 2449 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 RNU6-266P-201ENST00000364225 107 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 RNU6-74P-201ENST00000384235 107 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AL590002.1-201ENST00000406554 418 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 RNU6-1054P-201ENST00000411293 104 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 MTCO3P29-201ENST00000432119 779 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AC000111.3-201ENST00000433478 193 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC88CQ9P219 SCARNA18-201ENST00000459004 134 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 RNU6-1037P-201ENST00000459571 107 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 GMFBP1-201ENST00000467831 427 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AF186996.7-201ENST00000492781 209 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC88CQ9P219 HIF1AP1-201ENST00000553642 175 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 MIR3672-201ENST00000584290 82 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AL451064.1-201ENST00000607718 471 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC88CQ9P219 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AC009509.4-201ENST00000619202 509 ntBASIC0.63□□□□□ -2.31
CCDC88CQ9P219 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC88CQ9P219 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CCDC88CQ9P219 SNORA72.3-201ENST00000365074 132 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 MIR549A-201ENST00000385268 96 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AL590135.1-201ENST00000422215 156 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC019205.3-201ENST00000424573 156 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC016700.2-201ENST00000446011 156 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RPS27AP8-201ENST00000452665 445 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RNU7-94P-201ENST00000459576 63 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC015911.1-201ENST00000495111 156 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AGGF1P4-201ENST00000568249 801 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 MIR4703-201ENST00000577728 79 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RN7SL793P-201ENST00000583259 296 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RNU6-89P-201ENST00000606519 100 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC008536.2-201ENST00000607284 349 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RMST_3.1-201ENST00000611651 109 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 PCGEM1.1-201ENST00000613431 131 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC063943.3-201ENST00000615562 356 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC072046.2-201ENST00000618366 268 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RNU6-336P-201ENST00000364891 107 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.378-201ENST00000365652 113 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 SNORD116-8-201ENST00000384365 95 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms