Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNA5SP112-201ENST00000515937 99 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-475P-201ENST00000516073 104 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 SNORA40.14-201ENST00000516543 86 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-58P-201ENST00000517143 103 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AC040926.1-201ENST00000530195 238 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 CYP4A27P-201ENST00000567218 190 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AC090617.3-201ENST00000573670 475 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 MIR3923-201ENST00000579521 83 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AC113195.1-201ENST00000579952 141 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 MIR4672-201ENST00000583126 81 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AC124312.5-201ENST00000604451 268 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AL162730.1-201ENST00000605734 292 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AL078596.1-201ENST00000624856 447 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
SMARCAL1Q9NZC9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.34□□□□□ -2.04
SMARCAL1Q9NZC9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SMARCAL1Q9NZC9 Y_RNA.153-201ENST00000363615 91 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 RNU4-56P-201ENST00000364700 142 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 RNA5SP160-201ENST00000364866 120 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 RPL30P4-201ENST00000429309 333 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 USP9YP16-201ENST00000430287 407 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 MTCO3P8-201ENST00000453691 755 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 USP9YP23-201ENST00000455085 407 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-717P-201ENST00000459076 104 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 U8.20-201ENST00000459445 131 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 AC145146.1-201ENST00000496370 254 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-567P-201ENST00000516746 107 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 AC022868.1-201ENST00000517767 391 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 MIR3199-1-201ENST00000582434 88 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 AC137590.2-201ENST00000619709 240 ntBASIC2.33□□□□□ -2.04
SMARCAL1Q9NZC9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 RNU1-72P-201ENST00000362976 153 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-486P-201ENST00000363116 107 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 MIR10B-201ENST00000385011 110 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 SNORA12-201ENST00000391162 147 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 HMGB3P2-201ENST00000411913 584 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 AC022616.4-201ENST00000522985 181 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 MIR5695-201ENST00000579717 85 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 AC016727.2-201ENST00000603988 621 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 AL138825.1-201ENST00000618587 192 ntBASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMARCAL1Q9NZC9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AC080128.1-201ENST00000474389 1917 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-1309P-201ENST00000363305 108 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 RNA5SP213-201ENST00000391031 106 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 RNA5SP201-201ENST00000410316 124 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 DPH3P2-201ENST00000422618 250 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 EIF1P2-201ENST00000428233 350 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 IFNA11P-201ENST00000446352 526 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AC090515.1-201ENST00000465295 476 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-911P-201ENST00000516523 104 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 SCARNA3-201ENST00000517097 143 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AL442163.3-201ENST00000554110 156 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AL449363.1-201ENST00000617815 186 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AC090517.3-201ENST00000625170 141 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 ZNF204P-201ENST00000416749 2397 ntBASIC2.31□□□□□ -2.04
SMARCAL1Q9NZC9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RNA5SP289-201ENST00000362332 137 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RNA5SP361-201ENST00000362686 118 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-1301P-201ENST00000362724 104 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-879P-201ENST00000364328 108 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-1105P-201ENST00000384774 107 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 SNORA46.1-201ENST00000391069 153 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RNU6-159P-201ENST00000391080 106 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RNU1-139P-201ENST00000391307 165 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 RPS26P42-201ENST00000413485 326 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 AL358176.2-201ENST00000425769 204 ntBASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.3□□□□□ -2.04
SMARCAL1Q9NZC9 AC010469.2-201ENST00000496412 480 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms