Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RNU6-667P-201ENST00000517186 102 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 AC034114.1-201ENST00000520293 285 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 AC022616.8-201ENST00000533569 253 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 EIF4A1P12-201ENST00000551910 141 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 AC026271.5-201ENST00000577873 130 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 AL117336.2-201ENST00000602435 335 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 AC016727.2-201ENST00000603988 621 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NLGN3Q9NZ94 U3.9-201ENST00000363823 204 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 RNU4-9P-201ENST00000364951 139 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 RNU6-1093P-201ENST00000391194 107 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 RNU2-41P-201ENST00000410991 178 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 AL590556.1-201ENST00000423231 483 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 USMG5P1-201ENST00000425964 177 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 CBX3P6-201ENST00000430257 527 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 AL353997.1-201ENST00000432936 108 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 OR2AQ1P-201ENST00000451972 200 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 MTCO3P10-201ENST00000455912 772 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 Y_RNA.632-201ENST00000459189 102 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 MIR5701-3-201ENST00000578890 82 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 MIR5701-1-201ENST00000585138 82 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 MIR5701-2-201ENST00000615634 82 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 AL008636.1-201ENST00000625038 1018 ntBASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.91□□□□□ -2.1
NLGN3Q9NZ94 Y_RNA.58-201ENST00000362807 102 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 RNU1-17P-201ENST00000363022 152 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 RNU4-73P-201ENST00000363164 141 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.154-201ENST00000363624 102 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 RNY3P1-201ENST00000365085 102 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 RNY3-201ENST00000365484 102 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.387-201ENST00000383918 102 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.490-201ENST00000384413 102 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 RNU6-1297P-201ENST00000384415 104 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 HMGN2P39-201ENST00000398005 273 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 MTND3P22-201ENST00000510932 243 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 AP000942.3-201ENST00000603702 160 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 AC091932.3-201ENST00000624223 323 ntBASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NLGN3Q9NZ94 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 RNU6-874P-201ENST00000362390 105 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.67-201ENST00000362870 100 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 SNORD115-32-201ENST00000364079 82 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 RNU6-743P-201ENST00000364151 106 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 MIR32-201ENST00000384965 70 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 SNORA40.19-201ENST00000390846 128 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 RNY4P36-201ENST00000391116 96 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 MIR1294-201ENST00000408503 142 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 AC004866.1-201ENST00000411748 78 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 snoU13.30-201ENST00000458951 104 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 TOMM22P6-201ENST00000465035 409 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 ATP5EP1-201ENST00000510257 156 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.718-201ENST00000517110 102 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 NDUFA5P6-201ENST00000542110 379 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 AC027288.2-201ENST00000553028 243 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 AC090517.1-201ENST00000569307 266 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 MIR4795-201ENST00000584182 89 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 PISRT1.1-201ENST00000616930 107 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 AL359697.1-201ENST00000624879 587 ntBASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
NLGN3Q9NZ94 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.140-201ENST00000363474 103 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 RNU6-234P-201ENST00000365229 104 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 SNORA18.2-201ENST00000383865 132 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.405-201ENST00000383979 100 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 RNU6-26P-201ENST00000383985 107 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 RNU6-890P-201ENST00000384121 107 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.451-201ENST00000384200 100 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 RNU6-17P-201ENST00000384245 107 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 RNU6-18P-201ENST00000384527 107 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.524-201ENST00000384564 100 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.561-201ENST00000384694 100 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms