Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 SNORA44-201ENST00000384584 132 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 U3.26-201ENST00000391236 204 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 RNA5SP129-201ENST00000410276 118 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 COTL1P1-201ENST00000422309 375 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC112220.1-201ENST00000434628 355 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC007969.2-201ENST00000441891 191 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC074290.1-201ENST00000448883 135 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 snoU13.4-201ENST00000458916 104 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 RNU7-107P-201ENST00000459121 61 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 SNRPGP7-201ENST00000469016 106 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC107027.2-201ENST00000512197 115 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC021269.2-201ENST00000532318 330 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 CYCSP26-201ENST00000534107 320 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC016256.1-201ENST00000547971 354 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AC127455.1-201ENST00000565496 145 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 LARP7P3-201ENST00000579888 337 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AL137790.1-201ENST00000634283 177 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMPD4Q9NXE4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SMPD4Q9NXE4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU6-801P-201ENST00000364087 105 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU6-142P-201ENST00000384019 107 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 MIR591-201ENST00000385290 95 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU6-460P-201ENST00000391158 108 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 EI24P2-201ENST00000397776 1076 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU2-54P-201ENST00000410299 190 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU6-1064P-201ENST00000410626 104 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RPL26P27-201ENST00000414397 437 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 SNRPEP9-201ENST00000436794 238 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AC025750.2-201ENST00000442609 450 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 SCARNA8-201ENST00000515924 131 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNA5SP468-201ENST00000516782 93 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU6-453P-201ENST00000516819 85 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 RNU6-703P-201ENST00000516946 107 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 SNORD84-203ENST00000584275 78 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AL138963.2-201ENST00000605137 226 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
SMPD4Q9NXE4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 MIR22-201ENST00000362190 85 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 RNU6-50P-201ENST00000362356 103 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 SNORD56.1-201ENST00000362913 68 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 SNORA26.5-201ENST00000391215 123 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC009963.1-201ENST00000417265 157 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 RPL23AP58-201ENST00000440453 469 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 GPM6BP3-201ENST00000442797 145 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC091179.3-201ENST00000474761 144 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC092991.1-201ENST00000477176 376 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 RN7SKP164-201ENST00000516138 266 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC093331.1-201ENST00000521474 169 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 HSPE1P4-201ENST00000550617 308 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC009127.3-201ENST00000570531 403 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 MIR3921-201ENST00000577308 85 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC024614.2-201ENST00000577584 372 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 MIR4679-2-201ENST00000578358 77 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 TUG1_4.1-201ENST00000619464 181 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AF117829.1-206ENST00000621883 3802 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMPD4Q9NXE4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 MTND5P32-201ENST00000560711 1802 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms