Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 SNORD115-38-201ENST00000365037 82 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 EI24P2-201ENST00000397776 1076 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 RNA5SP38-201ENST00000410750 119 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 RPL30P13-201ENST00000418873 348 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.98□□□□□ -1.77
ATG3Q9NT62 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG3Q9NT62 snoU13.6-201ENST00000458785 104 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 AC100767.1-201ENST00000528178 123 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 TRAV28-201ENST00000557548 323 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 MIR5571-201ENST00000577998 113 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 AC020895.1-201ENST00000595362 272 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 AC004467.1-201ENST00000615678 330 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 AC091932.3-201ENST00000624223 323 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG3Q9NT62 AC091152.2-201ENST00000591628 2569 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG3Q9NT62 SNORA72.2-201ENST00000365028 127 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 RNU6-80P-201ENST00000384195 107 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 RNU6-429P-201ENST00000384582 108 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 MIR888-201ENST00000401186 77 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 Y_RNA.595-201ENST00000410403 105 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 RNA5SP293-201ENST00000410527 113 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.97□□□□□ -1.77
ATG3Q9NT62 AL358075.3-201ENST00000426289 226 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC108938.1-201ENST00000451204 136 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC010401.1-201ENST00000463867 348 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 Y_RNA.797-201ENST00000515977 94 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 RNU6-1282P-201ENST00000516735 96 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 RNA5SP291-201ENST00000517222 105 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC018448.1-201ENST00000552843 316 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC136601.2-201ENST00000604356 474 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 AC006111.3-201ENST00000622137 383 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 AL359693.1-201ENST00000614959 2407 ntBASIC3.97□□□□□ -1.77
ATG3Q9NT62 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ATG3Q9NT62 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG3Q9NT62 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG3Q9NT62 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG3Q9NT62 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.96□□□□□ -1.78
ATG3Q9NT62 MIR591-201ENST00000385290 95 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 RNU6-763P-201ENST00000390865 106 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 RNY4P18-201ENST00000391107 89 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 RNU6-1077P-201ENST00000410506 102 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 ELOCP21-201ENST00000412558 336 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 EBAG9P1-201ENST00000418955 543 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 PTGES3P4-201ENST00000426243 356 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG3Q9NT62 RNU6-625P-201ENST00000459412 107 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 AL121594.1-201ENST00000475906 575 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 RNA5SP367-201ENST00000516557 118 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 RNU6-703P-201ENST00000516946 107 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 RNU6-1183P-201ENST00000517054 60 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG3Q9NT62 MIR4431-201ENST00000579990 94 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.96□□□□□ -1.78
ATG3Q9NT62 AC010999.1-201ENST00000611856 324 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.96□□□□□ -1.78
ATG3Q9NT62 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
ATG3Q9NT62 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG3Q9NT62 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ATG3Q9NT62 PWAR6-201ENST00000552334 4618 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 RNU6-899P-201ENST00000363947 107 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 snoU2_19.4-201ENST00000364329 80 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 RNU6-898P-201ENST00000365627 104 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 RNU6-142P-201ENST00000384019 107 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 Y_RNA.420-201ENST00000384043 110 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 MIR549A-201ENST00000385268 96 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 SNORA40.19-201ENST00000390846 128 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 SNRPEP9-201ENST00000436794 238 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 AC007969.2-201ENST00000441891 191 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG3Q9NT62 SNRPGP7-201ENST00000469016 106 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 RPL30P12-201ENST00000474666 353 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 RNU6-155P-201ENST00000516347 100 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 AP004607.1-201ENST00000524456 203 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 MIR3609-201ENST00000582661 80 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 ELOCP29-201ENST00000588193 334 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 DNAJC19P2-201ENST00000593340 302 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG3Q9NT62 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG3Q9NT62 AC007496.3-201ENST00000624987 3443 ntBASIC3.95□□□□□ -1.78
ATG3Q9NT62 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG3Q9NT62 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG3Q9NT62 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG3Q9NT62 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ATG3Q9NT62 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG3Q9NT62 RNU6-1255P-201ENST00000363434 112 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 RNU6-578P-201ENST00000390980 103 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 MIR513C-201ENST00000401352 84 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 AC092047.1-201ENST00000424997 240 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 AL135790.2-201ENST00000437701 267 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 AC006539.3-201ENST00000454258 129 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 RNU7-197P-201ENST00000458836 62 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 RN7SL442P-201ENST00000473804 320 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 RNU6-659P-201ENST00000516454 104 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms